Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01304 ATGGTGATGATATGGGAAGATGTAACAGTTGAGCGACCTGCAAGTTTTGGAGCACACGATAACAAGAAGTTGCTTAATAGAATCACTGGCTTTGCTGAACCTGCTAGGATTATGGCTGTCATGGGTCCTTCTGGCTGCGGCAAAACTACCTTTCTTGActctatcactggtctgtctctctctctctctctctctgtatACAAGAAGAAGTTGCTTAGTGGAATCACTGGTTTTGCTGAAGCTGGTAGGATCATGGCTGTCATGGGTCCTTCTGGCTCTGGCAAAACCACCCTCCTCGACTCATTGGCTGGAAGACTTCCTGTAAATGTTGTTGTAACCGGGAACATTCTAATCAATGGGAAGAGAAGCTTATATTCCAAGGAAGTGTCCTACGTTGCACAAGAGGAACTTTTCTTGGGTACTTTGACTGTAAAAGAGACCCTAACTTACTCTGCAAACACGAGGCTTCCTTCTAAAATGAGCAAAGAAGAGATAAACAAAGTGGTGGAAGAAACAATAATGGAAATGGGTCTGGAAGATTGTGCAGATACTAGGATTGGAAATTGGCATTGTAGGGGTATTAGTAATGGTGAAAAGAAGAGACTTAGCATTGGCCTTGAGATTCTGACACAACCCCATGTCTTACTTCTTGATGAACCTACTACTGGACTTGATAGTGCCTCAGCTTTCTATGTCATTCAATCTCTATGCCACATTGCTCTCAATGGAAAGATAGTTATCTGCTCCATTCACCAACCCAGTAGTGAAACTTTTGATCTATTTGATGATTTGCTTTTGCTCTCAATTGGGGAAACTGTTTATTTTGGGGAAGCCAACATGGCTCTAAAGTTTTTTGCTGATGCAGGGTTACCCTTCCCTTCTAGAAGAAATCCTTCAGATCATTTCCTTCTGTGTATCAATTTGGACTTTGACCTGCTTACTTCAGCTCTAGCAAGATCACAGTTAGATTTGCCATCTTCATCAAATTCAGCACTGGGAACAAAAAAAGCCGAGATTAGAGAGACACTCATTCGAAGTTATAAAGGTTCAGGGATAATGATCAATGCGAGAAGAAGAATTCAACAACTGAAACCTAATGAGGAGCAAAAAATTAAGCCCAACATAGGTAGCAGTGCCACATGGTGGAAGCAATTGTGCACATTGACCAAGCGATCTTTCGTAAACATGACTAGGGATATTGGTTACTACTGGCTGAGGATGGTATTCTACATATTGGTAGGAATCACTGTTGGCACCCTCTATTTTCATATTGGCACAGCCAACAACTCAATATTGGATAGAGGAAAGTGTGTATCATTCATCTATGGGTTCAATATTTGTTTGTCATGTGGAGGATTACCATTTTTCATTGAAGAATTGAAGGTGTTCTATGGTGAAAGGTCCAAAGGGCATTATGGAGAGGCTGCATTTGTAGTTTCAAACATCATATCATCATTCCCTTTCCTTGTTCTAACATCTCTCTCGTCTGGAATAATCATTTACTTCATGGTGCAACTTCATCCGGGTTTAACTAATTTTGCATTTTTCTGTATCGACTTATTCTGCTGCATATCCGTTGTTGAGTGCTGCATGATGATTGTAGCCTCAGTGGTCCCCAATGTGCTGATGGGCTTAGGAACAGGAACTGGTGTAATTGTTTTCATGATGATGCCCTCTCTATTATTCAGACCACTGCAAGACATTCCAAAGTTCTTTTGGCGCTACCCCATGTCATACCTCAGTTTTACTACATGGGCAGTGCAGGGACAGTACAAGAATGACATGCTGGGGCTTGAATTTGATCCTCTGCTACCTGGGAACCCAAAACTCACTGGGGAGCAAGTCCTAACATTGTTATTTGGTGTCCCGTTGAATCATGGCAAATGGTGGGACTTAACAGCATTGATTATTTTGTTAATAGTTCACAGATTGCTTCTTTTCTTGGCGCTTCGGTATAGCAAAAGATCATCGACATCCCCCATAAGAAAAAAAACAAATCAAATTTCTCTCATAAGAGGGTGGTGTGAGGTCAGAATGATTGCATGCGCAACGTTACGTGCAGAGATCTGTGAAAAATGTGATGGTTGTCGGAGAGAAGAAGAACGGGATGGAGGGTGTTCACCTTTAGAATGCAAGTGCAACGGCGGAGGGCCATCGTCGACCTTTGAAACTTTTCTTGATCTGAGTATTTTTTTCTTAATCTGGGTTTTAGGTTGTTTTCACTTCTTTAAAAGGTTTAAATATGTTGTAGGGATACTTCCCACCAATGTTGGCATGACCGGAAATGTACTACTCAAGGGGACTACCAGAAGTACAGGCTGCATAGATATTATTGACAAGGTGGTAACCAAGATACTAGCTGAAATGGGTCTGCAAGATAGTACAGATAGCAGACTTGGGAATTGGCATTTGAGAGGCATAAGTAGTGGAGAGAAAAGAAGGGTTAGCATAGGCATTGAGATCATAACTCAACCTCATGTGATGTTTCTGGATGAACCCACTAGTGGGTTGGATACACATGATGGAAGAATAGTTATATGCTGCATTCACCAGCCAAGAGGTGAAGTTTTCAACCTTTTTGACGATCTGGTCCTCCTTTCAGGAGGTGAAGCTGTATATTTTGGAGAAGCAACTATGACTGTAAAGTTCTTTGCAGATGCAGGGTTCCCTTGTCCAACTAGAATAAGTCCTCCTGAGCATTTCCTTGGTTGTGTTAGCTCAGAGTTCAATGGTGTTGCAGCCTTAATGCAGTCCAAAAATGTTAGTGAAGCCTCATCTTCATGGAATTCTCTAATGAATATGACAACAGAAGTGATCAAATCAGAACTCATAAAGTACTACAGGAATTCCATTCATTCAGAAAATGCAAGGAAAAAAAATCAGAGAAATCAAACGAAGCTGAAGCAGCTATGCACATTGACAAATAGATCAATCCTAAATATGACCAGAGACATTGGTTACTATTGTTTAAGGATTGTATTCTATATCTTTATATCAGTTAGGGCTGGTTTCCTTCTTTTCAACATAGGAACAAGTACTGAAGCAATCTTAACTAGAGGCAAGTGTGATGGATTCATCGTTGGCTTAATGATCTACATATGTTTAGGCGGCGTACCCTTTTACCATGAGGAATTAAAGGTATTCATGATGGTGCCATCTAATATATTCAGAAGTCTAGCAGACCTTCCAAAATTCTTTTGGCGCTATCCTATGTCCTATATCAGCTACATTACATGGTCAATACAGGGTCAGTTCAAGAATGACCTGATTGGTCTTGAATTTGAACCAGAGGTGCCTGGGGATACCAAGATAAAGGGTGAAGAGATACTTAACAATATGTTTGGAATTCGAAATGGTGGGACTTAG 3366 0.4034 MVMIWEDVTVERPASFGAHDNKKLLNRITGFAEPARIMAVMGPSGCGKTTFLDSITGLSLSLSLSVYKKKLLSGITGFAEAGRIMAVMGPSGSGKTTLLDSLAGRLPVNVVVTGNILINGKRSLYSKEVSYVAQEELFLGTLTVKETLTYSANTRLPSKMSKEEINKVVEETIMEMGLEDCADTRIGNWHCRGISNGEKKRLSIGLEILTQPHVLLLDEPTTGLDSASAFYVIQSLCHIALNGKIVICSIHQPSSETFDLFDDLLLLSIGETVYFGEANMALKFFADAGLPFPSRRNPSDHFLLCINLDFDLLTSALARSQLDLPSSSNSALGTKKAEIRETLIRSYKGSGIMINARRRIQQLKPNEEQKIKPNIGSSATWWKQLCTLTKRSFVNMTRDIGYYWLRMVFYILVGITVGTLYFHIGTANNSILDRGKCVSFIYGFNICLSCGGLPFFIEELKVFYGERSKGHYGEAAFVVSNIISSFPFLVLTSLSSGIIIYFMVQLHPGLTNFAFFCIDLFCCISVVECCMMIVASVVPNVLMGLGTGTGVIVFMMMPSLLFRPLQDIPKFFWRYPMSYLSFTTWAVQGQYKNDMLGLEFDPLLPGNPKLTGEQVLTLLFGVPLNHGKWWDLTALIILLIVHRLLLFLALRYSKRSSTSPIRKKTNQISLIRGWCEVRMIACATLRAEICEKCDGCRREEERDGGCSPLECKCNGGGPSSTFETFLDLSIFFLIWVLGCFHFFKRFKYVVGILPTNVGMTGNVLLKGTTRSTGCIDIIDKVVTKILAEMGLQDSTDSRLGNWHLRGISSGEKRRVSIGIEIITQPHVMFLDEPTSGLDTHDGRIVICCIHQPRGEVFNLFDDLVLLSGGEAVYFGEATMTVKFFADAGFPCPTRISPPEHFLGCVSSEFNGVAALMQSKNVSEASSSWNSLMNMTTEVIKSELIKYYRNSIHSENARKKNQRNQTKLKQLCTLTNRSILNMTRDIGYYCLRIVFYIFISVRAGFLLFNIGTSTEAILTRGKCDGFIVGLMIYICLGGVPFYHEELKVFMMVPSNIFRSLADLPKFFWRYPMSYISYITWSIQGQFKNDLIGLEFEPEVPGDTKIKGEEILNNMFGIRNGGT 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01304 1121 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 294 IPR003439 GO:0005524
Gma19g01304 1121 Pfam ABC-2 type transporter 384 589 IPR013525 GO:0016020|GO:0140359
Gma19g01304 1121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 58 IPR027417 -
Gma19g01304 1121 Gene3D - 64 285 IPR027417 -
Gma19g01304 1121 Pfam ABC-2 type transporter 850 967 IPR043926 GO:0140359
Gma19g01304 1121 Pfam ABC-2 type transporter 251 303 IPR043926 GO:0140359
Gma19g01304 1121 ProSitePatterns ABC transporters family signature. 807 821 IPR017871 GO:0005524
Gma19g01304 1121 SMART AAA_5 81 279 IPR003593 -
Gma19g01304 1121 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 63 748 - -
Gma19g01304 1121 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 1 57 - -
Gma19g01304 1121 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 776 1048 - -
Gma19g01304 1121 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 1046 1117 - -
Gma19g01304 1121 Gene3D - 4 63 IPR027417 -
Gma19g01304 1121 Pfam ABC transporter 79 221 IPR003439 GO:0005524
Gma19g01304 1121 Pfam ABC transporter 778 835 IPR003439 GO:0005524
Gma19g01304 1121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 778 882 IPR027417 -
Gma19g01304 1121 Gene3D - 759 886 IPR027417 -
Gma19g01304 1121 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 63 748 - -
Gma19g01304 1121 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 57 - -
Gma19g01304 1121 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 776 1048 - -
Gma19g01304 1121 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1046 1117 - -
Gma19g01304 1121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 282 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01304 Gma-Chr19 42272848 42285660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01304 52 255 Calmodulin-binding Proteins AT2G36910 29.032 4.89e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01304 - K05681 gmx:100787198 1162.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01304 19 42272848 42285660 Gma03g01258 03 38526904 38532445 GST