Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01294 ATGGAGAGAACTCTCCTCAAGAATTTCGAGCTCGAGCACAAAAATCCCTCCGTCGAAGCCCTCCGCCGATGGAGATCCGCCGTCACTTTCGTCAAGAACCACCGCCGCCGCTTCCGCATGGTCGCCGATCTCGACAAGCGCGTCGAAGCCGAGCAGATTAAGCAGGGAATCAAGGAAAAATTTCGAATTGCTCTCTACGTTCAAAAGGCAGCATTACAATTTATCGATGCTGGTAATCGAGTCGAGTACAAACTATCAAGTGAGGTAAGAGATGCTGGTTTTGGTATTCATCCAGATGAGATTGCTTCTATTGTTCGTGGTCATGATAACAAGACCTTAAATGATATTGGTGGAGTTGAATCCATTGCAAGGAAATTGTTAGTTTCGGTAGATGGAGGTGTCAACGAAGAGAGTATAAATAGCAGACAACAGATTTATGGATTCAATCGTTATACCGAAAAACCTTCTAGGTCGTTCCTGATGTTTGTGTGGGATGCATTGCAGGACTTAACTCTAATCATTCTCATGGTTTGTGCTGTAGTTTCTATAGGTATAGGGATTGCCACTGAAGGGTGGCCAAAGGGAACTTATGATGGTGTGGGAATCATACTCAGTATATTCTTGGTCGTCATTGTTACAGCTGTCAGTGATTACAAGCAGTCCCTGCAGTTCAGGGATTTGGACAAAGAGAAGAAAAAGATATTTGTTCAGGTCAATAGAGATGGGAAAAGACAAAAGATCTCAATTTATGATATAGTAGTTGGTGATGTTGTTCATTTGTCAACTGGGGATCAAGTTCCCGCTGATGGGATTTTTATATCAGGATACTCTTTGCTTATTGATGAATCGAGTTTGTCAGGTGAGAGCGAACCGGTAAATATAAATGAAGAAAAACCTTTTCTTCTCTCAGGAACCAAAGTGCAGGATGGTCAGGGGAAGATGTTGGTTACAACTGTTGGCATGAGGACTGAATGGGGAAAATTGATGGAGACTCTAAACCAGGGAGGAGAGGATGAAACCCCATTGCAGGTTAAATTAAATGGAGTTGCTACTATTATTGGTCAAATTGGTTTGACATTTGCCATTCTGACATTTGTGGTGTTGACAGTTAGGTTTGTGGTCGAAAAAGCGCTTCATGGTGAGTTTGCCAGTTGGTCTTCAGATGATGCAAAGAAGTTACTGGACTTCTTTGCTATTGCTGTAACCATAATAGTTGTTGCGGTTCCTGAAGGATTACCACTGGCTGTGACACTCAGTCTTGCTTTTGCAATGAAAAAACTAATGAATGACAAGGCACTTGTAAGACATCTTTCTGCTTGTGAGACTATGGGTTCAGCTAGTTGCATTTGCACAGATAAGACAGGGACATTGACCACTAACAAAATGGTGGTTACTAAAGCATGGATATGCGAAAAATCCATGGAGATAAAAGGTAATGAGAGTGCAGACGAACTGAAAACATGTACATCTGAAGGAGTTCTAAACATCCTTTTGCAGGCTATATTTCAAAATACTTCTGCTGAAGTAGTCAAGGATAAAAATGGAAAGGACACTATATTGGGAACCCCAACAGAATCAGCATTATTGGAATTTGGCTGCCTCTTGGGTGCTGATTTTGATGCGTATGCACAGCGTAGAGAGTATAAGATACTCCAAGTTGAGCCATTCAATTCAGTCCGCAAGAAAATGTCTGTGCTTGTGGGTCTTCCTGATGGAGGAGTCCGAGCTTTCTGCAAAGGTGCATCAGAAATAATATTAAAAATGTGTGACAAAATTATGGATTGCAATGGGGAAGTTGTTGATCTTCCTGAAGACCGGGCAAATAATGTCTCTGCTGTTATAAATGCCTTTGCCTCTGAAGCTTTGAGAACTATTTGCTTGGCCTTTAAAGAGATAAATGAAACCCATGAACCCAACATTTCAGATAGTGGCTATACTTTCATAGCCTTAGTAGGAATCAAGGATCCTGTACGCCCTGGGGTTAAGGAAGCAATTCAAACTTGTATAGCTGCTGGAATAACTATCCGCATGGTTACTGGTGATAACATAAATACAGCTAAAGCTATAGCTAAAGAATGTGGTTTACTTACAGAGGGTGGTCTAGCCATAGAAGGTCCAGATTTTCGTGACTTGTCTCCTGAGCAAATGAAGGATGTTATACCAAGAATCCAGGTGATGGCACGATCCTTACCTCTGGACAAGCACAGATTAGTAACCAATTTGAGGAAATTGTTTGGTGAGGTTGTTGCTGTTACTGGTGATGGAACTAATGATGCTCCTGCACTGTGCGAGGCAGACATTGGACTTGCAATGGGCATAGCAGGAACTGAGGTTGCCAAAGAAAATGCCGATGTCATTATAATGGATGATAACTTCACGACTATTGTCAATGTTGTCAAATGGGGACGTGCAGTATACATAAACATTCAAAAATTTGTGCAGTTTCAATTGACAGTTAATGTTGTTGCTCTGGTTATCAACTTCTTTTCTGCGTGCATCACTGGATCTGCTCCACTCACCGCTGTTCAGTTGCTTTGGGTCAACTTGATCATGGACACTCTTGGTGCATTAGCCCTGGCTACTGAACCTCCTAACGATGGACTTTTGAAAAGACCCCCAGTTGCAAGGGGAGCAAACTTTATCACCAAACCTATGTGGAGGAATATCATAGGTCAAAGCATATATCAATTAATCATCCTAGGGATTCTAAATTTTGACGGGAAGAGGCTACTCGGACTTAGTGGTTCAGATGCAACGAAAGTGCTCAACACTTTGATATTCAACTCCTTTGTATTTTGCCAGGTGTTTAATGAGATAAACAGCAGAGATATTGATAAGATAAACATATTCAGAGGCATGTTTGACAGCCGGATATTTTTGGCGATAATTTTCGCCACCGTGGCATTTCAAGTGGTGATAGTTGAATTCCTTGGAACGTTTGCCAGCACTGTGCCTCTAAACTGGCAATTCTGGTTACTAAGTGTGGTAATCGGAGCAGTTAGCATGCCTATAGCTGCTATCCTCAAGTGCATCCCAGTTGAAAGAGATACTAGTAAGCAGCACCATGATGGTTATGAAGCACTGCCATCTGGTCCCGAGCTGGCATAA 3108 0.4199 MERTLLKNFELEHKNPSVEALRRWRSAVTFVKNHRRRFRMVADLDKRVEAEQIKQGIKEKFRIALYVQKAALQFIDAGNRVEYKLSSEVRDAGFGIHPDEIASIVRGHDNKTLNDIGGVESIARKLLVSVDGGVNEESINSRQQIYGFNRYTEKPSRSFLMFVWDALQDLTLIILMVCAVVSIGIGIATEGWPKGTYDGVGIILSIFLVVIVTAVSDYKQSLQFRDLDKEKKKIFVQVNRDGKRQKISIYDIVVGDVVHLSTGDQVPADGIFISGYSLLIDESSLSGESEPVNINEEKPFLLSGTKVQDGQGKMLVTTVGMRTEWGKLMETLNQGGEDETPLQVKLNGVATIIGQIGLTFAILTFVVLTVRFVVEKALHGEFASWSSDDAKKLLDFFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNKMVVTKAWICEKSMEIKGNESADELKTCTSEGVLNILLQAIFQNTSAEVVKDKNGKDTILGTPTESALLEFGCLLGADFDAYAQRREYKILQVEPFNSVRKKMSVLVGLPDGGVRAFCKGASEIILKMCDKIMDCNGEVVDLPEDRANNVSAVINAFASEALRTICLAFKEINETHEPNISDSGYTFIALVGIKDPVRPGVKEAIQTCIAAGITIRMVTGDNINTAKAIAKECGLLTEGGLAIEGPDFRDLSPEQMKDVIPRIQVMARSLPLDKHRLVTNLRKLFGEVVAVTGDGTNDAPALCEADIGLAMGIAGTEVAKENADVIIMDDNFTTIVNVVKWGRAVYINIQKFVQFQLTVNVVALVINFFSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLLKRPPVARGANFITKPMWRNIIGQSIYQLIILGILNFDGKRLLGLSGSDATKVLNTLIFNSFVFCQVFNEINSRDIDKINIFRGMFDSRIFLAIIFATVAFQVVIVEFLGTFASTVPLNWQFWLLSVVIGAVSMPIAAILKCIPVERDTSKQHHDGYEALPSGPELA 1035
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01294 1035 SFLD C1.7: P-type atpase like 432 804 - -
Gma19g01294 1035 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Gma19g01294 1035 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Gma19g01294 1035 PRINTS P-type cation-transporting ATPase superfamily signature 649 660 - -
Gma19g01294 1035 PRINTS P-type cation-transporting ATPase superfamily signature 671 681 - -
Gma19g01294 1035 PRINTS P-type cation-transporting ATPase superfamily signature 752 771 - -
Gma19g01294 1035 PRINTS P-type cation-transporting ATPase superfamily signature 776 788 - -
Gma19g01294 1035 SUPERFAMILY Calcium ATPase, transduction domain A 235 331 IPR008250 -
Gma19g01294 1035 SMART Cation_ATPase_N_a_2 115 187 IPR004014 -
Gma19g01294 1035 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 1013 IPR023298 -
Gma19g01294 1035 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 549 697 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma19g01294 1035 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 719 839 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma19g01294 1035 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 202 473 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma19g01294 1035 Gene3D - 133 333 - -
Gma19g01294 1035 PANTHER CALCIUM-TRANSPORTING ATPASE 45 1019 - -
Gma19g01294 1035 CDD P-type_ATPase_Ca_PMCA-like 139 885 - -
Gma19g01294 1035 SFLD p-type atpase 432 804 IPR044492 -
Gma19g01294 1035 SUPERFAMILY HAD-like 449 857 IPR036412 -
Gma19g01294 1035 Pfam E1-E2 ATPase 236 428 - -
Gma19g01294 1035 PANTHER CATION TRANSPORTING ATPASE 45 1019 - -
Gma19g01294 1035 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 49 IPR024750 GO:0005516
Gma19g01294 1035 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Gma19g01294 1035 Pfam Cation transport ATPase (P-type) 504 592 - -
Gma19g01294 1035 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 110 1014 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Gma19g01294 1035 Pfam Cation transporter/ATPase, N-terminus 117 182 IPR004014 -
Gma19g01294 1035 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 661 IPR023299 GO:0000166
Gma19g01294 1035 Gene3D - 16 77 - -
Gma19g01294 1035 Gene3D - 460 656 IPR023299 GO:0000166
Gma19g01294 1035 Pfam Cation transporting ATPase, C-terminus 837 1010 IPR006068 -
Gma19g01294 1035 Gene3D - 165 1011 - -
Gma19g01294 1035 Gene3D - 447 797 IPR023214 -
Gma19g01294 1035 PRINTS H+-transporting ATPase (proton pump) signature 610 628 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma19g01294 1035 PRINTS H+-transporting ATPase (proton pump) signature 752 768 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma19g01294 1035 PRINTS H+-transporting ATPase (proton pump) signature 784 809 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma19g01294 Gma-Chr19 42133406 42144133 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01294 57 1032 Primary Pumps ATPases AT3G57330 73.361 0.0 1479
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01294 K01537 - gmx:100783489 2006.88
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01294 19 42133406 42144133 Gma19g01294 19 42133406 42144133 ECH
Gma19g01294 19 42133406 42144133 Gma03g01245 03 38365039 38377734 GST
Gma19g01294 19 42133406 42144133 Gma10g01019 10 26991708 26996238 PCT
Gma19g01294 19 42133406 42144133 Gma02g01751 02 39071432 39083184 PCT
Gma10g01019 10 26991708 26996238 Gma19g01294 19 42133406 42144133 PCT
Gma02g01751 02 39071432 39083184 Gma19g01294 19 42133406 42144133 PCT