Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01270 ATGAAGGTTGAAATTGAAGGCAGCCACAGTGATTATGCTGAATCTGTTTCCAGCCAACCAGAAAATAGAGGAAGATTGGAATCCAAGAAGAAACTGAAGAAAGTGAGGTCAATAAGGCTTGTAAGATTGCCAAGCAAGAGATCATCCACCAGAGGAGGGAGACCCCAATATGACCCTCTTTCCATTGATACAAAAAGTTTAGAGGGGCCAACACCAATTGAAATGGCAGATGCATCACCTAATTACATGAAGGCTACCAGCAGTTCTCATGCAAAGGATAGTTTTCAGAATACAGAAAGAATACTATTCACAAAGAAGACTTTGACAAGAATGTCTACTGCTTTGAAACTGAAGAGAAGTCTGACTAGAAAGATATCTGGAAGGACTGAACCAAAGAGGAAACTGAAGTCCTCAAGATCAGTCAGGTTTGCAGCTGTCAAGGGCCAAAAATCAACCAGAAAGTTTTATGAATCTAGTTATGGAAGTGATGACCAGAATTGGAGAAGTGCAAGTGATGCTGCTAACAAACCCCAGAGAGTCATGACCAGAAGATTAAGCTTGAAGCCTGTGAGGATCTTAACAAAGATGCCTACTTTCAAATCAAATAATTCTTCCATGGAGAGTGGCCATCAGATGTCTCAATCCCCAGACACAAGCTTGCATAGAGCCACTTGTTCTTCTGCTCTCAAGGATTCCCATTTTCCTGATCACATTGATCTCCCTCAAGAGGGAAGTGACTCTCAAGGAGTATCAGCTGTGAAGGTTTGTCCATATTCTTACTGCTCACTTCACGGTCACTGCCACGCCAATCTGCCTCCACTGAAGCGCTTTGTGTCAATGAGGAGGCGTGCGTTGAAGAGCCAAAAGCCAACAAAAATGGATCGTCAACCTGTTACTAGATCAAAGCAGATTGGTAATGCAAAGAAGGCCGCTCCGAAAACTCAAACTATCCATGGTGAAGATGGCAGGTCTCATTTTGAGAACAAGAAAAAGATGGCAAGGGGCTTATGGATTAGGCCACATGGCACTCCAGCATCCACTGTTTCTGAAGGTGTGGAATCAACATCAACAGATGGAGTCGAGTTTTCTGCTCCTGATACTGAGATATTGGATGGAGAAGTAACCAACACTGGAATCACAAGCAAAAATATGGAGCCGGATTATGAAGTACTGATGATGAGTTCTGTACAGAAAGAGCCTACTGATATGGCATGTGGAATGAAGGAAAGAGATAAAAAATATGCCAAAATGTGGCAGTTGATGTATAAGCATGCTGTATTGAGTACCACAGGTGAAAATAAGCAGCAATTTGATGGGAAGGACAAGGAAGGAAGAGATCAAGATTCCCTTGCAACTAATGAAGTGAACAAATCTTGTAGCGATGGTTGCGATACAGACCAGGACATGGATGATGAAAATAAGGATGCAATTGAGCTGGTGCAGAAAGCATTTGATGAAATCCTTCTTCCAGAACCTGAAGACTTCTTTTCTGATGATCAATTCAAATCTGAAGGCATTGATTCAGATGAGGCACACTTACAAAAGAGTGAAGCTGAGAGAGAAAGGAATACCTCAACATCCACACAATCTCCAAGAGCACAGAGGATGGGGACCAAACCTGACCAAAGAGGTCCAAAAAGCTGGAGCAATCTGAAGAAGTTAATCCTCTTGAAAAGGTTTGTGAAAGCATTAGAGAAGGTAAGAAACATCAACCCCCAAAGACCAAGACATTTTCCTTCCGATGCTAACTTAGAAATGGAAAAAGTTTTTCTCAAGCACCAAACAGCAGAAGAGAAGAAGAATGCTGAGGAATGGATGCTTGACTATGCACTTCAAAAGGTTGTTTCTAAACTTGCACCTGCTCAAAGACAAAAGGTGGCACTTCTAGTAAAAGCTTTTGAAACAATTCTTCCATTTCAAGATGCTGAAAATAGTCCACGGTTTTCTGCAACGATGGAACCTCAAGCAAATCCAGTTCAACCCCTTGATGATTCCTCAAATCATAGAGAGGAAGAAACATCATTTTTTCATGATAGTAGTATGGAAATGGAAGATAATGATAGTGATGATCCAATTCCAGAACTGCACAATCCTACTATGCTCAAAGAAAGATGTCTTGACTATCCTGGAACTGAGACAGTCAAGAACAAGCCAGCATTTGGAGCTACTGAAGAAGACTTGACTGGAAAGCAAAGTTTAGCTGGCAGTTATGGTAATGGGGAGAAGATATCAAGTGACACTGATAATATTTATCTAGGAGAGATCAAAGATACCACATCAAGTTCCTTAAATGAGCCAGTTGAAATTATAAGAAGCAGTCACGAGGAGGCTCCAACTGATGAAATAGTCAATGATGTTCCAGAAGATTTGCTATCCAGTGTGAATACAGAAAATCCAGATATGAAATCTGAGTCACCTGGAAGAGACGTTGAAACCAAGAGTCTGAAGGGTGACAATGGGCGACAATTTTCCATGTCCAAAAGTTTAGTCCTAGAAGGTCTAGTTAGATCACTCAGATCTAATTTGATCGGTTCAGGAGCACCAGCAAATGAAGCAGCTACTGAAAGAAAAGAAGAAATTGAAAATGTTAATATGGGAATTGAGACTCTTGAAGAGTTCCCTACAAAGGAACAATCTGAAGCTCCTACAAGTGCGGTTGTAGAACCTGAGACCCCTGTAGAGAAACAAAGCAACACAGGATTGTGGTACTTGGTGTATAAGCACATGGTATCAAATGTGGCGGAAAACAACTCTGAGTCACTAATTGATGGGGCAGACGAGAAAGAGTCAGGGTTGGATGACATCAGAACAGGAGTAACTTCTAATGCTTATGGAAATACACCTATGAAGGATCAAGAGATGCAATTCAAGGATCACGTTGTAGTTGATCCAGAAGTTGCACGCCAACAGATTGAAGCCATCAAGATGGTAGAAGAAGCAATTGATTCAATTCTTCCAGATGATCAGGATGACTTAGCAGACAAGGAATCACTCACAGACAGCACAATTTCTGACAACGCCAAACAATCCGACAGAACTGAGAGAATGCACAGTGAAGACCTGAACCAAAAAGAAGAAAAGATGGAATCCGGGAATGGAATGATCCAAAAACAAGAAGAAGAATCAGCACCAAAGGAGCAAAACAAAACAAACCAGAAAATGTCTAGAAGTTGGAGCAATCTTAAAAAAGTGATCCTGCTTAGGAGATTCATCAAGTCATTGGAAAAAGTAAGGAAATTCAACCCAAGAGGGACCAGATATCTACCTCTAGAACCTGATTCAGAAGCTGAAAAAGTTAACTTAAGGCATCAAGACATGGAAGAAAGAAAAGGCACCGAAGAATGGATGCTTGATTATGCACTTCGACAGGTTGTTTCCAAATTAACCCCTGCTAGGAAAAGAAAAGTGGAGCTGCTAGTGGAAGCTTTTGAAACAGTCATGCCAACCATAAAAAATTGA 3459 0.4114 MKVEIEGSHSDYAESVSSQPENRGRLESKKKLKKVRSIRLVRLPSKRSSTRGGRPQYDPLSIDTKSLEGPTPIEMADASPNYMKATSSSHAKDSFQNTERILFTKKTLTRMSTALKLKRSLTRKISGRTEPKRKLKSSRSVRFAAVKGQKSTRKFYESSYGSDDQNWRSASDAANKPQRVMTRRLSLKPVRILTKMPTFKSNNSSMESGHQMSQSPDTSLHRATCSSALKDSHFPDHIDLPQEGSDSQGVSAVKVCPYSYCSLHGHCHANLPPLKRFVSMRRRALKSQKPTKMDRQPVTRSKQIGNAKKAAPKTQTIHGEDGRSHFENKKKMARGLWIRPHGTPASTVSEGVESTSTDGVEFSAPDTEILDGEVTNTGITSKNMEPDYEVLMMSSVQKEPTDMACGMKERDKKYAKMWQLMYKHAVLSTTGENKQQFDGKDKEGRDQDSLATNEVNKSCSDGCDTDQDMDDENKDAIELVQKAFDEILLPEPEDFFSDDQFKSEGIDSDEAHLQKSEAERERNTSTSTQSPRAQRMGTKPDQRGPKSWSNLKKLILLKRFVKALEKVRNINPQRPRHFPSDANLEMEKVFLKHQTAEEKKNAEEWMLDYALQKVVSKLAPAQRQKVALLVKAFETILPFQDAENSPRFSATMEPQANPVQPLDDSSNHREEETSFFHDSSMEMEDNDSDDPIPELHNPTMLKERCLDYPGTETVKNKPAFGATEEDLTGKQSLAGSYGNGEKISSDTDNIYLGEIKDTTSSSLNEPVEIIRSSHEEAPTDEIVNDVPEDLLSSVNTENPDMKSESPGRDVETKSLKGDNGRQFSMSKSLVLEGLVRSLRSNLIGSGAPANEAATERKEEIENVNMGIETLEEFPTKEQSEAPTSAVVEPETPVEKQSNTGLWYLVYKHMVSNVAENNSESLIDGADEKESGLDDIRTGVTSNAYGNTPMKDQEMQFKDHVVVDPEVARQQIEAIKMVEEAIDSILPDDQDDLADKESLTDSTISDNAKQSDRTERMHSEDLNQKEEKMESGNGMIQKQEEESAPKEQNKTNQKMSRSWSNLKKVILLRRFIKSLEKVRKFNPRGTRYLPLEPDSEAEKVNLRHQDMEERKGTEEWMLDYALRQVVSKLTPARKRKVELLVEAFETVMPTIKN 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01270 1152 MobiDBLite consensus disorder prediction 647 685 - -
Gma19g01270 1152 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 6 1150 IPR044681 GO:0005516
Gma19g01270 1152 MobiDBLite consensus disorder prediction 431 467 - -
Gma19g01270 1152 MobiDBLite consensus disorder prediction 647 663 - -
Gma19g01270 1152 Pfam Plant calmodulin-binding domain 1043 1148 IPR012417 GO:0005516
Gma19g01270 1152 Pfam Plant calmodulin-binding domain 535 638 IPR012417 GO:0005516
Gma19g01270 1152 MobiDBLite consensus disorder prediction 1 70 - -
Gma19g01270 1152 MobiDBLite consensus disorder prediction 202 223 - -
Gma19g01270 1152 MobiDBLite consensus disorder prediction 435 450 - -
Gma19g01270 1152 PANTHER CALMODULIN BINDING PROTEIN PICBP 6 1150 - -
Gma19g01270 1152 MobiDBLite consensus disorder prediction 791 819 - -
Gma19g01270 1152 MobiDBLite consensus disorder prediction 986 1056 - -
Gma19g01270 1152 MobiDBLite consensus disorder prediction 509 545 - -
Gma19g01270 1152 MobiDBLite consensus disorder prediction 664 682 - -
Gma19g01270 1152 SMART CaM_binding_2 1034 1148 IPR012417 GO:0005516
Gma19g01270 1152 SMART CaM_binding_2 524 638 IPR012417 GO:0005516
Gma19g01270 1152 Coils Coil 1021 1041 - -
Gma19g01270 1152 MobiDBLite consensus disorder prediction 285 326 - -
Gma19g01270 1152 MobiDBLite consensus disorder prediction 802 816 - -
Gma19g01270 1152 MobiDBLite consensus disorder prediction 1007 1047 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01270 Gma-Chr19 41817024 41820590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01270 460 647 Calmodulin-binding Proteins AT5G04020 37.368 4.56e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01270 - - gmx:100820346 2273.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01270 19 41817024 41820590 Gma19g01270 19 41817024 41820590 ECH
Gma19g01270 19 41817024 41820590 Gma03g01216 03 38034553 38038129 GST