Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01263 ATGGGGATGGCTGCAGAGTCACAGTTTCATGTCTTGGCTGTTGATGACAGTCTCATAGATAGGAAACTCATTGAGAGGCTCCTCAGAACCTCTTCTTATGAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTCTGGGGTTGTGTGAGAATGATGAGAGCAACCCAAGTACACCATATGTTTGTCCCAACAACCATCAGGAGGTGGAGGTGAATCTTGTTATAACAGATTACTGTATGCCTGGCATGACAGGCTATGACTTGCTTAAGAAAATCAAGGAATCTTCATCTTTGAGAAACATACCGGTGGTGATTATGTCATCTGAAAATGTGCCTTCAAGGATTAACAGATGTTTGGAGGAAGGAGCAGAAGAATTTTTCTTGAAGCCTGTGAGGCTGTCAGATTTAAACAAGCTTAAACCCCATATGAAGAAAACCAAGTTGAAAGATCAAAAACAAGGAACAGTAGAAAAGCTTGAAGACTTAGAAGTTCAACAGCAACAGCCACAACAACAAATCATCATCCAAAATGAGCAGCAACAAGCACCAAAATCCCGAGATCTTCTTCAGCCAGAGTCAGAGTCACATCCACATGCACAACCAACTATTGAACAACAGCAACAATCACTACAACAAGCCAACAACAATAGCAAGAGGAAGACCATGGAACAGGGCCTTTCACCTGAGACTGACAGAACAAGACCAAGATACAGTGGCATAGCCACTGTGGTATGA 741 0.4224 MGMAAESQFHVLAVDDSLIDRKLIERLLRTSSYEVTTVDSGSKALEFLGLCENDESNPSTPYVCPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLSDLNKLKPHMKKTKLKDQKQGTVEKLEDLEVQQQQPQQQIIIQNEQQQAPKSRDLLQPESESHPHAQPTIEQQQQSLQQANNNSKRKTMEQGLSPETDRTRPRYSGIATVV 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01263 246 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 3 242 - -
Gma19g01263 246 Gene3D - 10 235 - -
Gma19g01263 246 MobiDBLite consensus disorder prediction 197 225 - -
Gma19g01263 246 SUPERFAMILY CheY-like 8 141 IPR011006 -
Gma19g01263 246 CDD REC_typeA_ARR 11 141 - -
Gma19g01263 246 Coils Coil 147 167 - -
Gma19g01263 246 MobiDBLite consensus disorder prediction 180 246 - -
Gma19g01263 246 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 242 IPR045279 GO:0009736
Gma19g01263 246 SMART REC_2 9 142 IPR001789 GO:0000160
Gma19g01263 246 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Gma19g01263 246 Coils Coil 205 225 - -
Gma19g01263 246 Pfam Response regulator receiver domain 11 140 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01263 Gma-Chr19 41672499 41674095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01263 1 246 Response Regulator Gene Family AT3G57040 63.200 3.24e-97 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma19g01263 Response_reg 9.1e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01263 K14492 - gmx:100814494 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01263 19 41672499 41674095 Gma03g01208 03 37878903 37881113 GST