Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01226 ATGACCATGCTGCCTCGGTCATTTACTATGATTGCAACAATAATAATCATTGTTCTTGCTCAAACACTTGTGGGGGTGATTTCACTTCCTGAAGCTGATAAAATAAGCAATTTGCCGGGCCAGCCACAGGTCGAATTTCAGCAATATTCTGGTTATGTCACCGTGGATGATCAACATCAGAGAGCTTTGTTTTACTACTTTGTTGAAGCTGAAGAAGACCCTGCTTCCAAGCCATTAGTCCTCTGGTTGAATGGAGGGCCCGGTTGTTCGTCGATTGGAGTTGGAGCTTTTGCTGAGCATGGTCCTTTCAGACCAAGTGACAACAATGTTCTTCAGCAAAATGATTATAGTTGGAACAAAGTGGCAAATGTGCTATACTTGGAGTCACCAGCTGGTGTTGGATTCTCTTACTCCAGCAATAAATCTTTCTATGCCTCAGTGACAGATGAAATTACAGCTAGGGATAATCTTGTTTTCCTACAGCGTTGGTTCACTAAATTCCCTGAGTACTCAAACAACGACTTCTTCATTACAGGGGAGAGCTATGGAGGTCACTATGTTCCACAGCTTTCACAACTTATTGTTCAAACCAAGACCAACTTCAATCTCAAGGGGATAGCAATAGGGAATCCTCTTCTTGAGTTTAATACTGATTTCAACTCCAGATCTGAGTACTTTTGGTCTCATGGACTGATATCAGATTCAACATACGAAGTCTTAACTAGAGTCTGCAACTTTTCCTCAATTAGGAGACAAATCCAAAATGGGAATCTTAGAGGCGTTTGTGTAAAAGCAAATAAGCTATTGAATACTGAGATTAGCAACTTTATAGATAAATATGATGTCACTCTCGATGTTTGTTTGTCATCAGTAAATCAACAGGCTTATGTGCTGAATCAACTGCAAGAGACACAGAAGATAGATGTTTGTATTGGTGATAAAACAACCACAtacttgaacagaaaacaagtccaaaaagctctacatgctaatcttgttggagtcaccaaatGGTCAACTTGCAGCTCAGTTCTGCATTATGACTATCAGAATCTAGAAATACCAACAATTCCTATTCTAGGGTCACTTGTTAAGTCTGGCATCAAGGTTCTAGTATACAGTGGAGATCAAGATTCAGTGATTCCATTAATAGGTTCGCGATCTCTAGTGAATGGATTAGCCAAGGAAATTGGACTTGATACAACAGTGGCCTATAGAGCCTGGTTTGAGGGAAAACAGGTGGCAGGATGGACAAAGGTATATGGGAACATCTTATCATATGCCACTATAAGAGGTGCATCTCATGAAGCTCCCTTTTCTCAACCACAGAGATCACTGCTGCTACTTAAAGCATTTCTGGAAGGAAAGCCACTACCTGGTGTTGCATAA 1389 0.3895 MTMLPRSFTMIATIIIIVLAQTLVGVISLPEADKISNLPGQPQVEFQQYSGYVTVDDQHQRALFYYFVEAEEDPASKPLVLWLNGGPGCSSIGVGAFAEHGPFRPSDNNVLQQNDYSWNKVANVLYLESPAGVGFSYSSNKSFYASVTDEITARDNLVFLQRWFTKFPEYSNNDFFITGESYGGHYVPQLSQLIVQTKTNFNLKGIAIGNPLLEFNTDFNSRSEYFWSHGLISDSTYEVLTRVCNFSSIRRQIQNGNLRGVCVKANKLLNTEISNFIDKYDVTLDVCLSSVNQQAYVLNQLQETQKIDVCIGDKTTTYLNRKQVQKALHANLVGVTKWSTCSSVLHYDYQNLEIPTIPILGSLVKSGIKVLVYSGDQDSVIPLIGSRSLVNGLAKEIGLDTTVAYRAWFEGKQVAGWTKVYGNILSYATIRGASHEAPFSQPQRSLLLLKAFLEGKPLPGVA 462
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01226 462 ProSitePatterns Serine carboxypeptidases, serine active site. 177 184 IPR018202 GO:0004185
Gma19g01226 462 ProSitePatterns Serine carboxypeptidases, histidine active site. 425 442 IPR033124 GO:0004185
Gma19g01226 462 Gene3D - 310 346 - -
Gma19g01226 462 Gene3D alpha/beta hydrolase 30 289 IPR029058 -
Gma19g01226 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 460 IPR001563 GO:0004185|GO:0006508
Gma19g01226 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Gma19g01226 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Gma19g01226 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Gma19g01226 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Gma19g01226 462 Gene3D - 356 455 - -
Gma19g01226 462 Pfam Serine carboxypeptidase 39 455 IPR001563 GO:0004185|GO:0006508
Gma19g01226 462 PANTHER CARBOXYPEPTIDASE 12 460 - -
Gma19g01226 462 SUPERFAMILY alpha/beta-Hydrolases 36 459 IPR029058 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma19g01226 Gma-Chr19 41099146 41102011 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01226 318 458 Calmodulin-binding Proteins AT2G22960 31.915 1.13e-19 84.7
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01226 19 41099146 41102011 Gma19g01226 19 41099146 41102011 ECH
Gma19g01226 19 41099146 41102011 Gma03g01172 03 37312474 37315248 GST