Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma19g01226 | ATGACCATGCTGCCTCGGTCATTTACTATGATTGCAACAATAATAATCATTGTTCTTGCTCAAACACTTGTGGGGGTGATTTCACTTCCTGAAGCTGATAAAATAAGCAATTTGCCGGGCCAGCCACAGGTCGAATTTCAGCAATATTCTGGTTATGTCACCGTGGATGATCAACATCAGAGAGCTTTGTTTTACTACTTTGTTGAAGCTGAAGAAGACCCTGCTTCCAAGCCATTAGTCCTCTGGTTGAATGGAGGGCCCGGTTGTTCGTCGATTGGAGTTGGAGCTTTTGCTGAGCATGGTCCTTTCAGACCAAGTGACAACAATGTTCTTCAGCAAAATGATTATAGTTGGAACAAAGTGGCAAATGTGCTATACTTGGAGTCACCAGCTGGTGTTGGATTCTCTTACTCCAGCAATAAATCTTTCTATGCCTCAGTGACAGATGAAATTACAGCTAGGGATAATCTTGTTTTCCTACAGCGTTGGTTCACTAAATTCCCTGAGTACTCAAACAACGACTTCTTCATTACAGGGGAGAGCTATGGAGGTCACTATGTTCCACAGCTTTCACAACTTATTGTTCAAACCAAGACCAACTTCAATCTCAAGGGGATAGCAATAGGGAATCCTCTTCTTGAGTTTAATACTGATTTCAACTCCAGATCTGAGTACTTTTGGTCTCATGGACTGATATCAGATTCAACATACGAAGTCTTAACTAGAGTCTGCAACTTTTCCTCAATTAGGAGACAAATCCAAAATGGGAATCTTAGAGGCGTTTGTGTAAAAGCAAATAAGCTATTGAATACTGAGATTAGCAACTTTATAGATAAATATGATGTCACTCTCGATGTTTGTTTGTCATCAGTAAATCAACAGGCTTATGTGCTGAATCAACTGCAAGAGACACAGAAGATAGATGTTTGTATTGGTGATAAAACAACCACAtacttgaacagaaaacaagtccaaaaagctctacatgctaatcttgttggagtcaccaaatGGTCAACTTGCAGCTCAGTTCTGCATTATGACTATCAGAATCTAGAAATACCAACAATTCCTATTCTAGGGTCACTTGTTAAGTCTGGCATCAAGGTTCTAGTATACAGTGGAGATCAAGATTCAGTGATTCCATTAATAGGTTCGCGATCTCTAGTGAATGGATTAGCCAAGGAAATTGGACTTGATACAACAGTGGCCTATAGAGCCTGGTTTGAGGGAAAACAGGTGGCAGGATGGACAAAGGTATATGGGAACATCTTATCATATGCCACTATAAGAGGTGCATCTCATGAAGCTCCCTTTTCTCAACCACAGAGATCACTGCTGCTACTTAAAGCATTTCTGGAAGGAAAGCCACTACCTGGTGTTGCATAA | 1389 | 0.3895 | MTMLPRSFTMIATIIIIVLAQTLVGVISLPEADKISNLPGQPQVEFQQYSGYVTVDDQHQRALFYYFVEAEEDPASKPLVLWLNGGPGCSSIGVGAFAEHGPFRPSDNNVLQQNDYSWNKVANVLYLESPAGVGFSYSSNKSFYASVTDEITARDNLVFLQRWFTKFPEYSNNDFFITGESYGGHYVPQLSQLIVQTKTNFNLKGIAIGNPLLEFNTDFNSRSEYFWSHGLISDSTYEVLTRVCNFSSIRRQIQNGNLRGVCVKANKLLNTEISNFIDKYDVTLDVCLSSVNQQAYVLNQLQETQKIDVCIGDKTTTYLNRKQVQKALHANLVGVTKWSTCSSVLHYDYQNLEIPTIPILGSLVKSGIKVLVYSGDQDSVIPLIGSRSLVNGLAKEIGLDTTVAYRAWFEGKQVAGWTKVYGNILSYATIRGASHEAPFSQPQRSLLLLKAFLEGKPLPGVA | 462 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma19g01226 | 462 | ProSitePatterns | Serine carboxypeptidases, serine active site. | 177 | 184 | IPR018202 | GO:0004185 | |
Gma19g01226 | 462 | ProSitePatterns | Serine carboxypeptidases, histidine active site. | 425 | 442 | IPR033124 | GO:0004185 | |
Gma19g01226 | 462 | Gene3D | - | 310 | 346 | - | - | |
Gma19g01226 | 462 | Gene3D | alpha/beta hydrolase | 30 | 289 | IPR029058 | - | |
Gma19g01226 | 462 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 12 | 460 | IPR001563 | GO:0004185|GO:0006508 | |
Gma19g01226 | 462 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 114 | 126 | IPR001563 | GO:0004185|GO:0006508 | |
Gma19g01226 | 462 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 127 | 137 | IPR001563 | GO:0004185|GO:0006508 | |
Gma19g01226 | 462 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 163 | 188 | IPR001563 | GO:0004185|GO:0006508 | |
Gma19g01226 | 462 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 425 | 438 | IPR001563 | GO:0004185|GO:0006508 | |
Gma19g01226 | 462 | Gene3D | - | 356 | 455 | - | - | |
Gma19g01226 | 462 | Pfam | Serine carboxypeptidase | 39 | 455 | IPR001563 | GO:0004185|GO:0006508 | |
Gma19g01226 | 462 | PANTHER | CARBOXYPEPTIDASE | 12 | 460 | - | - | |
Gma19g01226 | 462 | SUPERFAMILY | alpha/beta-Hydrolases | 36 | 459 | IPR029058 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma19g01226 | Gma-Chr19 | 41099146 | 41102011 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma19g01226 | 318 | 458 | Calmodulin-binding Proteins | AT2G22960 | 31.915 | 1.13e-19 | 84.7 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma19g01226 | 19 | 41099146 | 41102011 | Gma19g01226 | 19 | 41099146 | 41102011 | ECH | |
Gma19g01226 | 19 | 41099146 | 41102011 | Gma03g01172 | 03 | 37312474 | 37315248 | GST |