Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01225 ATGTTTCCCCAGCCATGGATTTTCTTGATAGCTACAATCTTTGCAACTTCAGTGTTCATGTCCTCACTGGTTGAGTCATTTCCAGAAGCTGATAAGGTGAAATCCTTGCCTGAACAGTCACCTCTAGTTCTCTGGCTTAATGGAGAAAGTTATTTATGTGTCATTTTTTCAAGTTTCAATTGCCTTGTTGCCTCTGCTGGGCCTGTCTGTACATCCGTTGGAGTTGGAGCCTTCACAGAACATGGTCCTTTTGTTACAAATCAAGGAGAGGCTATTGAGAAAAATCAGTATAGTTGGAACAAAGAGGCAAACATTTTGTACCTAGAGTCACCGGCAGGTGTTGGATTCTCTTACTCTCTCAATTTGCCATTTTATAAAACACTGAATAATGAAGTCACGGCCCGAGACAGTCTGGTTTTCCTGCAGCGCTGGTTTGCCAAGTTCCCAGAATACAAGAATAGAGATTTTTATATAATGGGGGAGAGTTATGGAGGTAAAAGTAAAGTGAATTTCAACATAAAGGGAATAACAATAGGAAATCCTCTTCTGGATTTCGACACTGATATGAATGCAGTTGATGAATATTACTGGTCTCATGGAATTATAACTGATTATGCATACAAAATCATGACCTCTCTATGTAACTCGTCTAGAGTATTAAGAGAATACTTCAGTGGCCAAATTTCCAAAGATTGTGTCTTGTTGCAGCTCAAAAAGTCTCAGAAGTttgatgagtgtaatttgaaatattcagagatgtacttgaacaggaaagatgtgcagaaggctctccatgcccggctggattatgacccattgaacagagagataccaacaattaatgttgtcggcttctttgtaaaatcagtctatactggggatcaagactctgtgattccatgcatgggcacgagaagattggttgatagactagcaaagacactaggacttaaaacaaccgtgccttacagttcctggtttgtGGACAAGCAGGTTGGAGGATGGACACAAGTTTATGGCAATCACCTCTCGTATGCCACCGTAAGAGGAGCTTCACATGGCACTCCAGTTACTCAAGGACACATGGCCCCTTGCTTGAAATTGGCTCGTACCTCTGTGTCCTTGAGTTCTAAGGAGACAGGAACCTACGTCTGGTGGATGAATCAAGACCGTGTGATCAGAGCGTGA 1188 0.3283 MFPQPWIFLIATIFATSVFMSSLVESFPEADKVKSLPEQSPLVLWLNGESYLCVIFSSFNCLVASAGPVCTSVGVGAFTEHGPFVTNQGEAIEKNQYSWNKEANILYLESPAGVGFSYSLNLPFYKTLNNEVTARDSLVFLQRWFAKFPEYKNRDFYIMGESYGGKSKVNFNIKGITIGNPLLDFDTDMNAVDEYYWSHGIITDYAYKIMTSLCNSSRVLREYFSGQISKDCVLLQLKKSQKFDECNLKYSEMYLNRKDVQKALHARLDYDPLNREIPTINVVGFFVKSVYTGDQDSVIPCMGTRRLVDRLAKTLGLKTTVPYSSWFVDKQVGGWTQVYGNHLSYATVRGASHGTPVTQGHMAPCLKLARTSVSLSSKETGTYVWWMNQDRVIRA 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01225 395 Pfam Serine carboxypeptidase 235 362 IPR001563 GO:0004185|GO:0006508
Gma19g01225 395 Pfam Serine carboxypeptidase 35 218 IPR001563 GO:0004185|GO:0006508
Gma19g01225 395 SUPERFAMILY alpha/beta-Hydrolases 37 363 IPR029058 -
Gma19g01225 395 PRINTS Carboxypeptidase C serine protease (S10) family signature 95 107 IPR001563 GO:0004185|GO:0006508
Gma19g01225 395 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 169 IPR001563 GO:0004185|GO:0006508
Gma19g01225 395 PRINTS Carboxypeptidase C serine protease (S10) family signature 108 118 IPR001563 GO:0004185|GO:0006508
Gma19g01225 395 PRINTS Carboxypeptidase C serine protease (S10) family signature 343 356 IPR001563 GO:0004185|GO:0006508
Gma19g01225 395 PANTHER CARBOXYPEPTIDASE 239 368 - -
Gma19g01225 395 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 242 IPR001563 GO:0004185|GO:0006508
Gma19g01225 395 ProSitePatterns Serine carboxypeptidases, serine active site. 158 165 IPR018202 GO:0004185
Gma19g01225 395 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 239 368 IPR001563 GO:0004185|GO:0006508
Gma19g01225 395 Gene3D alpha/beta hydrolase 26 379 IPR029058 -
Gma19g01225 395 PANTHER CARBOXYPEPTIDASE 40 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01225 Gma-Chr19 41088526 41091571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01225 281 353 Calmodulin-binding Proteins AT2G22960 26.027 5.96e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01225 K16297 - gmx:100819443 546.969