Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01222 ATGAAGTCTTGGTCACTGGACGAGTGGAGGAAGTACTTTGGGTCAGCGAATTCGGATATATTTGAGATAATTGAGCACGCCATAATTGTGGCGGCTTCGGATTGCCCAAAGGAGTTTAGAGTAAGGAGGGATGGGATTGCAGAGAGGTTGTTTTCTTGCAGGTTGACTCGGTGTGTGGGGTGTGACCGTGTTGAGTTGGCTGTGGGTGCAGATAGTAAAGAGAAGCATGATGGTGATGGTGATGATGATAATGATAAGAGTGGGTATGAAAGAGATGGGGTTGAGTTTGAAGGTGCAGGGGCAAGCAAAGAGAGCAAGGTCAATGGGGATGGAGGGAGGGATGTGAATCTTGGTGATAGCAATTATAGCTTTGGGGAGGCTGAGGCATTGAGTGATGAGATGGAAGAAGAGTCTCGGTATGTTGCGGAGATTTTGAGGATCAGGGATGTTCTGCTTAACCCTGAAGATGAGTCTGAGGCTGTGTTATTTGATTCATTGAGGCGGCTTCAGTTGATGGAACTCACCGTGGACTGTTTAAAGGCAACTGAGATTGGCAAGGCTGTCAATCCTCTCCGAAAGCATGGATCAAAAGATATTCGTCAACTTTCAAGGACTCTTATCGATGGCTGGAAAGAAATGGTGGATGAGTGGGTCAAGGCCACTACTACCACAGCTATCACAGGTTCAGAAGAAGGTACACCGGATTCAGTGAATCCATCTGTTGTAGATGATGATGAAGAAGAAGGACTTCCATCACCTCCCTTGGATGAAGGGGCTTTCTTTGTCACTCAGGCTGGTTCAATGGAACTGTCACAGTTCTTTGATGGCATGGACGACGACGGAAATCCTCGACCAACTGGGCCATTCAGCAAGAACCGTGAGAATGGCAGAAAGCCGGTTTTCGACAGCCATGTTGTAGAGAAGAGGAAGTCGCAGGCTTCCCATGACACAGCCATCATTGACCGGGATGTTAAGAGTCAGCAGCAAGCAAAGAAAAATGAGGCTGTTGTGCCTGAGAGGCCAAATAAACCAGTAACAGCTGATTCCGGGCCTGGCAGACCCCCAAAATCAAATATGCAGAGAAAAAGTAATATGGAGCCAAAGATGCAGCAAAAAATGGAGAACAATTCAATCACAAGGAGGCCTCCAACCGGTCAGCTAGATAAATCCAAGCGTTCAGATGACTCGGCAGTCCAAGTGAAGCTAGAAGCCACCAAGAGGAAACTTCAGGAGAGCTATCAACAAGCTGAAAACGCCAAGAGGCAGAGGACAATACAAGTTATGGAAATAAACGATCTTCCCAAGCAAGagtactattcaagacctttcggtgcaacaaggtcttaa 1347 0.4581 MKSWSLDEWRKYFGSANSDIFEIIEHAIIVAASDCPKEFRVRRDGIAERLFSCRLTRCVGCDRVELAVGADSKEKHDGDGDDDNDKSGYERDGVEFEGAGASKESKVNGDGGRDVNLGDSNYSFGEAEALSDEMEEESRYVAEILRIRDVLLNPEDESEAVLFDSLRRLQLMELTVDCLKATEIGKAVNPLRKHGSKDIRQLSRTLIDGWKEMVDEWVKATTTTAITGSEEGTPDSVNPSVVDDDEEEGLPSPPLDEGAFFVTQAGSMELSQFFDGMDDDGNPRPTGPFSKNRENGRKPVFDSHVVEKRKSQASHDTAIIDRDVKSQQQAKKNEAVVPERPNKPVTADSGPGRPPKSNMQRKSNMEPKMQQKMENNSITRRPPTGQLDKSKRSDDSAVQVKLEATKRKLQESYQQAENAKRQRTIQVMEINDLPKQEYYSRPFGATRS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01222 448 MobiDBLite consensus disorder prediction 272 398 - -
Gma19g01222 448 MobiDBLite consensus disorder prediction 100 119 - -
Gma19g01222 448 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 4 437 - -
Gma19g01222 448 Pfam TFIIS helical bundle-like domain 166 214 IPR017923 -
Gma19g01222 448 SMART TFS2_5 141 216 IPR003617 GO:0005634
Gma19g01222 448 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 4 437 IPR044805 -
Gma19g01222 448 MobiDBLite consensus disorder prediction 295 329 - -
Gma19g01222 448 MobiDBLite consensus disorder prediction 224 258 - -
Gma19g01222 448 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 132 226 IPR035441 -
Gma19g01222 448 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 140 222 IPR035441 -
Gma19g01222 448 CDD TFIIS_I 142 215 - -
Gma19g01222 448 MobiDBLite consensus disorder prediction 356 384 - -
Gma19g01222 448 MobiDBLite consensus disorder prediction 72 92 - -
Gma19g01222 448 Coils Coil 399 426 - -
Gma19g01222 448 ProSiteProfiles TFIIS N-terminal domain profile. 142 217 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01222 Gma-Chr19 41026027 41032276 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Gma19g01222 Med26 1.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01222 - - gmx:100799367 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01222 19 41026027 41032276 Gma19g01222 19 41026027 41032276 ECH
Gma19g01222 19 41026027 41032276 Gma03g01165 03 37167838 37170785 GST