Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01220 ATGACAAAGATAAGTCCTGAAGTTGAAATCAGGATGCCAATGGAGGCATTTCCACCAGTTTCAGCTGATGTGAGCTTTATTTCTAATAGTTTTCCGAAATACAAACTGGATGTTGATAATCAAGTTCTGGAAGAGCCAGTTGAGGATAACCTGGGTCCTTCTTTGAAGGATGTTATTGAACAAGAAGCTTTCAATTTGTCAGACCAACACAAGCGTATCTCAGTTCGTGACCTTGCCAGTAAATTTGACAAGAACTTGGCTGCAGCTGCTAAGTTGTCTAATGAGGCAAAGCTGAGAGAGGTGGCATCTTTGGAGGGACATGTTCTTTTGAAAAAGCTAAGAGATGCATTAGAATCTTTAAGAGGACGTTTTGCAGGAATAAACAAAGAGGATGTGGAGAAAGCTATCTCTATGGTGGAAGCTTTAGCAGTTAAGTTAACTCAAAACGAAGGTGAATTGATTCAAGAGAAGTTTGAAGTGAAGAAGCTTGTAAACTTTCTCAAACAGGCTTCTGAAGATGCTAAAAAGTTGGTTAATCAAGAGAAGTCTTTTGCTTGTGCCGAAATTGAAAGTGCTAGAGCTGTGGTGCTGAGAATTGGGGAGGCGCTTGAAGAACAAGAAAAAGCTTCCCAAGCTTCTAAACCACAGGATGTGGATGGACTAATTGAAGAAGTTCAAGAAGCTAGAAGAATCAAATTGTTGCATCAGCCAAGCAAGGTGATGGCCATGGAATATGAACTACGTGCTCTTAGGGATCAAATTCGAGAGAAATCTATATTTTCAATTAAGCTTCAGAAAGAGCTAACCATGAGCAAGAGGGATGAGGAAAATAAATCTCGTTTATACATGTTAGATGGTTCTGAAGCTTTGGGTTCATATCTGCGAGTCCAGCCTTGCTCAGCTGAAGTGCCACAGGTTTCGAAATGTTCATTTCAGTGGTATCGCTTGTCTTCTGAAGGCAGCTGGAGGGAAGTTATTTCAGGTGCCAACAAAACAATATATGCTCCTGACCCCTCTGATGTTGGGAGAATCTTACAAGTAGATATTGTCTCAAATGGGAAAAAACTTACCCTAACAACTGATCCCATTCAAACTGTTTCAGGACTTGGAAGCCATGTGGAGACACTTCTACGAAAATCTAATACCGATTTTAATGTAGTTATTTCTCAAATGAATGGAAAAGATCACTCTTCACATTCTACTCATTCATTTAATGTGGGGAGAATGAGGATAAAGCTATGCAGAGGTTGGATTACAAAAGCAAGAGAGATTTACTCCCCATCAATGCAGCTATGTGGAGTTAGAAGTGATATCGCTAATGCAGCGAAGGCGTTGTTTTGGCAAGCAAGAAAGGGCCTCTCATTTGTATTAACCTTTGAATCAGAGAGAGACAGAAATGCAGCCATTATGGTTGCCAGGAAATATGCTCTTGATTGCAATGTCGTGCTCGCTGGGCCAGATGATCTAGTgatttttggtgccaaactacttggtaatgcaccaGCACCAGCAACTGCTGAAAATAACAAGAAACAAGCTTGTGCTAATGTGGCTGGTTCTCCTACTGTTGCTAATGGAGGAGTTGTGGTGGCCAAAAGAATGGCCCCCAAACCTGATCAGAAGAAAGTGGTCCTAAAACCTAAACCCAAAAAAGTCATTGACATCAAAGCTAGTCCAAACAAGAAGGAGGTCCTGAAAGACAAGAAGAAGGAAGGAGATTCCAACTTCAAGAAGAAATCACATCACACTCTTACTTTAGTGTTCACCACTAGAAGCAAGGCAACATGGGGCATAACTAACAAGTTGAAGGAGCGGATTATTGATATTGATTCCGATGATGTTGACGATGAGCTTGTTGTTGTGGAGTGTATTGATGACATTTACAAAGCTATACTGTTTGATTGGTTGATACTAGTCCACACCAAGTTTAACCTTTTACTTGAGACCCTTTACTTGACAATCAATATAGTTGATCGGTTCCTGGCAGTTAAGAATGTTCCAAAGAGGGAATTGCAATTGATTGACATCAGTGCCCTGCTGATGGCAACCAAGTATGAAGAAATCTATCCCCCTCAGGTATTTGGTAACTTTGTATGTCTCTCAGATAGGGCTTACACTCATGAACAAATACTGGTTATGGAGAAAATCATACTGGCCAAGCTGGAATGGACTTTGACTATGCCAATACCTTTGGTTTTCCTACTTCGTTTTATCAAGGCATCAGTCCCAGATCAGGAGTTAGAAAACATGGCCCATTTTTTGTCTGAGTTGGGAATGATGCACTATGCCACCATAAAGTACTTTCCATCAATGGTTGCTGCCTCAGCAGTCTTTGCAGCTAGATGCGCTCTGAATAAGGCTCCCCTTTGGAATGAGACACTTAAACTGCACAGTGGTTATTCACAAGAACAACTTATGCATGTGAATATGAATTGGGATTGTGCTAGATTATTGGTGAGTTTCCACTCTACGGTTGCGAATAGAGAGGAGAAGGTTGTGTACTTAAAGTATTCTGATCCTGAGAAAGGAGTTGTTGCTATGCTTCCACCAGCTAAAAATCTTCTGCCCGAAGGTTCTAACTCTCAATAG 2589 0.404 MTKISPEVEIRMPMEAFPPVSADVSFISNSFPKYKLDVDNQVLEEPVEDNLGPSLKDVIEQEAFNLSDQHKRISVRDLASKFDKNLAAAAKLSNEAKLREVASLEGHVLLKKLRDALESLRGRFAGINKEDVEKAISMVEALAVKLTQNEGELIQEKFEVKKLVNFLKQASEDAKKLVNQEKSFACAEIESARAVVLRIGEALEEQEKASQASKPQDVDGLIEEVQEARRIKLLHQPSKVMAMEYELRALRDQIREKSIFSIKLQKELTMSKRDEENKSRLYMLDGSEALGSYLRVQPCSAEVPQVSKCSFQWYRLSSEGSWREVISGANKTIYAPDPSDVGRILQVDIVSNGKKLTLTTDPIQTVSGLGSHVETLLRKSNTDFNVVISQMNGKDHSSHSTHSFNVGRMRIKLCRGWITKAREIYSPSMQLCGVRSDIANAAKALFWQARKGLSFVLTFESERDRNAAIMVARKYALDCNVVLAGPDDLVIFGAKLLGNAPAPATAENNKKQACANVAGSPTVANGGVVVAKRMAPKPDQKKVVLKPKPKKVIDIKASPNKKEVLKDKKKEGDSNFKKKSHHTLTLVFTTRSKATWGITNKLKERIIDIDSDDVDDELVVVECIDDIYKAILFDWLILVHTKFNLLLETLYLTINIVDRFLAVKNVPKRELQLIDISALLMATKYEEIYPPQVFGNFVCLSDRAYTHEQILVMEKIILAKLEWTLTMPIPLVFLLRFIKASVPDQELENMAHFLSELGMMHYATIKYFPSMVAASAVFAARCALNKAPLWNETLKLHSGYSQEQLMHVNMNWDCARLLVSFHSTVANREEKVVYLKYSDPEKGVVAMLPPAKNLLPEGSNSQ 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01220 862 PANTHER STOMATAL CLOSURE-RELATED ACTIN-BINDING PROTEIN 1 1 488 IPR039640 GO:0003779|GO:0007015|GO:0010119
Gma19g01220 862 Pfam Coiled-coil regions of plant-specific actin-binding protein 101 268 IPR032009 -
Gma19g01220 862 SMART Cyclin_C_2 728 851 IPR004367 -
Gma19g01220 862 PANTHER STOMATAL CLOSURE-RELATED ACTIN-BINDING PROTEIN 3 1 488 - -
Gma19g01220 862 Coils Coil 110 130 - -
Gma19g01220 862 Gene3D - 621 720 - -
Gma19g01220 862 Gene3D - 269 364 - -
Gma19g01220 862 Pfam Ig domain of plant-specific actin-binding protein 282 378 - -
Gma19g01220 862 CDD CYCLIN 728 804 IPR013763 -
Gma19g01220 862 SMART cyclin_7 732 820 IPR013763 -
Gma19g01220 862 SMART cyclin_7 634 719 IPR013763 -
Gma19g01220 862 Gene3D - 101 152 - -
Gma19g01220 862 Pfam Cyclin, N-terminal domain 628 725 IPR006671 -
Gma19g01220 862 Gene3D - 721 857 - -
Gma19g01220 862 Pfam PH domain of plant-specific actin-binding protein 381 488 IPR041144 -
Gma19g01220 862 Gene3D - 366 495 - -
Gma19g01220 862 SUPERFAMILY Cyclin-like 728 852 IPR036915 -
Gma19g01220 862 SUPERFAMILY Cyclin-like 624 725 IPR036915 -
Gma19g01220 862 Pfam Actin-binding domain of plant-specific actin-binding protein 55 97 IPR032012 GO:0003779
Gma19g01220 862 Pfam Cyclin, C-terminal domain 728 850 IPR004367 -
Gma19g01220 862 CDD CYCLIN 630 718 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01220 Gma-Chr19 40956276 40968170 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01220 529 855 Core Cell Cycle Gene Families AT4G37490 46.260 1.04e-88 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01220 - - gmx:100798320 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01220 19 40956276 40968170 Gma19g01220 19 40956276 40968170 ECH
Gma19g01220 19 40956276 40968170 Gma03g01162 03 37071257 37074388 GST