Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01209 ATGTCAATGGCACTCTCTCAGCTAAGCCAGTCTCTGGAAAATGAACTGAAAGGTGCTGAAGACTCCGAATTCCCTGTGAAGGAAATTGGAAATGAAGGTCTCACAAAACGGATTCTCAGAAAAGGAGTCACTTGGCAAAGTCCATTCTCTGGAGATGAAGTGGAAGTTCATTTCAGAGGACAAGTTGAAAACGGAGCAGCTCTTGAATCGAGTTATGATAAAGGGTCCCGGTTTCGTTTCAAATTAGGCCAATGTAAGCACTTCATTTTTATCAAAGGTTGGGATGAAGGAGTTGCCACCATGAAGAAAGGGGAGAGTGCAATCTTCAAAATACCACCTAACTTGGCATATGGGGAAGAAGGGGATTTGACTCGCCATGGAGGCATCAAGAAAAAGATCATACGGGAGGGAGAAGGATGGGCTACTCCCAGAGAAGCTGATGAGGTGCTAGTGAAATATGAAGCCAGACTAGAGAATGGGATGCTTGTCTCCAAGTCTGATCAGGGAGTCGAGTTTAATGTAAGTGATGGTACGTTAGTGAGAGTTGAGCATACTTTCAGCGCCTACTACTATAACGGGCTCGGTCAAAATTCAAATAAAATCACTGAGCTAGACGGTGTTCTTCCAGCAGATTCTAATTTAACTTGCATCAAGCTTGAGTTGGTATCATTGAAAATTGTTACTGATGTCACGGGAGATAAGAAGATACTTAAAAAAATTAAGAAAGCGGGTGAGGGGTTTGATCATCCTAACGAGGGATCCCAAGTGAAAGTGATATATTTGTGTAAAGGGGAAGATGGTACGGTTATTGAAAGCAAAGGATCAGAGGAAGAACCTTTTGAGTTGACAACTCAGGAAGAACCGGTACCCGAGGTTGAATTGGTTGATTTTGTTAAGGAAGAACCATTTTGGAAAATGGACACACAAGAGAAAATAGAAGTTTGTGAGAGGAAGAAGCATGATGGAAATCTGCTGTTCAAGGTTGAAAATTTCAGGCGCGCATCCAAGAAATATGAAAAGGCTGTAAAATACATAGAATTTGATCACTCATTTAGTGAAGATGAGAAGCATCGTGATAATACTTTACGTTTATCCTGTAATTTGAACAATGCTGCCGGTAAACTAAAATTGGGGGAGTACATTGAAGCATTGTGCACAAAGCGCGTAGAGAAATTGCAAAATGTGGGATGA 1191 0.4139 MSMALSQLSQSLENELKGAEDSEFPVKEIGNEGLTKRILRKGVTWQSPFSGDEVEVHFRGQVENGAALESSYDKGSRFRFKLGQCKHFIFIKGWDEGVATMKKGESAIFKIPPNLAYGEEGDLTRHGGIKKKIIREGEGWATPREADEVLVKYEARLENGMLVSKSDQGVEFNVSDGTLVRVEHTFSAYYYNGLGQNSNKITELDGVLPADSNLTCIKLELVSLKIVTDVTGDKKILKKIKKAGEGFDHPNEGSQVKVIYLCKGEDGTVIESKGSEEEPFELTTQEEPVPEVELVDFVKEEPFWKMDTQEKIEVCERKKHDGNLLFKVENFRRASKKYEKAVKYIEFDHSFSEDEKHRDNTLRLSCNLNNAAGKLKLGEYIEALCTKRVEKLQNVG 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01209 396 PANTHER PEPTIDYLPROLYL ISOMERASE 208 283 - -
Gma19g01209 396 PANTHER PEPTIDYLPROLYL ISOMERASE 3 121 - -
Gma19g01209 396 PANTHER PEPTIDYLPROLYL ISOMERASE 122 179 - -
Gma19g01209 396 PANTHER PEPTIDYLPROLYL ISOMERASE 291 391 - -
Gma19g01209 396 SUPERFAMILY FKBP-like 123 179 - -
Gma19g01209 396 SUPERFAMILY FKBP-like 223 317 - -
Gma19g01209 396 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 50 122 IPR001179 GO:0003755
Gma19g01209 396 Gene3D - 311 387 - -
Gma19g01209 396 Gene3D - 123 183 IPR046357 GO:0003755
Gma19g01209 396 Gene3D - 228 310 IPR046357 GO:0003755
Gma19g01209 396 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 208 283 - -
Gma19g01209 396 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3 121 - -
Gma19g01209 396 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 122 179 - -
Gma19g01209 396 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 291 391 - -
Gma19g01209 396 SUPERFAMILY TPR-like 305 384 IPR011990 GO:0005515
Gma19g01209 396 Gene3D - 7 122 IPR046357 GO:0003755
Gma19g01209 396 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 51 121 IPR001179 GO:0003755
Gma19g01209 396 SUPERFAMILY FKBP-like 29 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01209 Gma-Chr19 40823431 40827149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01209 28 390 Calmodulin-binding Proteins AT5G48570 42.129 1.12e-95 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01209 - - gmx:100785412 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01209 19 40823431 40827149 Gma19g01209 19 40823431 40827149 ECH
Gma19g01209 19 40823431 40827149 Gma03g01151 03 36886218 36890926 GST