Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01180 ATGGGATCTCAAGGTGGGACAACCCAAGACCAAGAGCCAAAGACTGGTTCTTTGACCAGGCAAGGGTCTTTGTACAATCTCACCCTTGATGAGGTGCAAAACCAGCTTGGAAATTTAGGGAAACCCTTAGGAAGCATGAATCTTGATGAGCTGCTCAAGAGTGTGTGGACTGCTGAATCTGGAACTGATGCTTACATGCAGCATGGTGGTCAGGTGGCTTCTGCTGGCTCATCTTTGAACCCACAAGGGAGCCTAACATTGAGTGGGAATCTTAGCAAGAAAACTATTGATGAGGTTTGGAGAGATATGCAACAAAATAAGAGTGTTGGTAAGGAAAGACAGCCTACACTTGGTGAGATGACCCTGGAGGATTTCTTGGTGAAGGCTGGTGTGGCTACTGAACCTTTTCCCAATGAGGATGGTGCCATGGCCATGTCAGGGGTTGATTCCCAACACAACACATCACAACATGCCCATTGGATGCAATACCAGCTCACTTCAGTTCAGCAGCAGCCACAGCAACAACAGCATCAGCATCAAAATcagcagaatagtgtgatgctgggtttttcgggttttatgactggccatgcggttcaacagcctaTACCGATTGTGGTGAATACGGTTCTGGATGCAGGATACTCAGAAGCATTGCCATCTTCTTTGATGGGTGCCTTGTCTGATTCACAAACTGCAGGTAGGAAAAGGGATGCCTCAGGTAACGTTGTTGAGAAAATTGTAGAGAGGAGGCAGAAGAGGATGATAAAAAATAGGGAATCTGCAGCTCGGTCCCGGGCTAGAAAACAGGCTTACACACAAGAGCTGGAGATTAAAGTTTCCCAATTAGAAGAAGAGAATGAAAGGCTTAGAAGACAGAATGAGATAGAGAGGGCATTGCCAAGTGCGCCACCACCTGACCCTAAGCATCAGCTTCGCAGAACTAGTTCAGCTCCCCTTTGA 963 0.4382 MGSQGGTTQDQEPKTGSLTRQGSLYNLTLDEVQNQLGNLGKPLGSMNLDELLKSVWTAESGTDAYMQHGGQVASAGSSLNPQGSLTLSGNLSKKTIDEVWRDMQQNKSVGKERQPTLGEMTLEDFLVKAGVATEPFPNEDGAMAMSGVDSQHNTSQHAHWMQYQLTSVQQQPQQQQHQHQNQQNSVMLGFSGFMTGHAVQQPIPIVVNTVLDAGYSEALPSSLMGALSDSQTAGRKRDASGNVVEKIVERRQKRMIKNRESAARSRARKQAYTQELEIKVSQLEEENERLRRQNEIERALPSAPPPDPKHQLRRTSSAPL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01180 320 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 253 268 IPR004827 GO:0003700|GO:0006355
Gma19g01180 320 SUPERFAMILY Leucine zipper domain 250 296 IPR046347 GO:0003700|GO:0006355
Gma19g01180 320 PANTHER BZIP TRANSCRIPTION FACTOR 2 318 - -
Gma19g01180 320 Gene3D - 248 300 - -
Gma19g01180 320 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 318 IPR043452 GO:0003700|GO:0045893
Gma19g01180 320 SMART brlzneu 246 314 IPR004827 GO:0003700|GO:0006355
Gma19g01180 320 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 248 293 IPR004827 GO:0003700|GO:0006355
Gma19g01180 320 Coils Coil 266 300 - -
Gma19g01180 320 CDD bZIP_plant_BZIP46 250 295 - -
Gma19g01180 320 Pfam bZIP transcription factor 250 295 IPR004827 GO:0003700|GO:0006355
Gma19g01180 320 MobiDBLite consensus disorder prediction 288 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01180 Gma-Chr19 40460909 40464980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01180 1 320 bZIP Transcription Factor Family AT3G56850 56.024 7.77e-105 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma19g01180 bZIP_1 4e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01180 K14432 - gmx:100783666 593.193