Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01177 ATGGCCGAGCCACAAGGTGGTATTGGTGGTGACAGTGGTGCTTCTGGAAGCAAGCGTAGAAGCACTGTTTCCAAGCGTGGCATGGTAGCACAAACACAAGATGAAGCAATAGTGGGATCTTCACCCGCAACACCATGTGGGGCTTGCAAGTTCTTGAGGAGGAAGTGCATTGGGGGATGCATTTTTGCACCCTACTTTTGTACTGATCAGGGTGCAGCTAAGTTTGCAGCTGTGCACAAGGTGTTTGGGGCTAGCAATGTGTCAAAGCTCTTGTCCAACATTCCGGCGAACCGCCGCCACGAAGCGGCAACATCCATATCGTATGAGGCTCAGGCAAGGCTGTCTGATCCAGTTTATGGTTGTGTCTCCACCATCCTTGCCCTGCAACAACAGGTGGTATCTTTGCAAGCAGAGCTAGCTATGTTGCAAACTCAACTCATGAATAGCAAGTTTTTCTATACAAGTGCTCTTCAAACCACACAACTACATCAACCAAACATGAATGCAGCAGCACTACATCCAGCATATTCCAACAATTCATGTGGTTCCACCAACCTTTTAAACTTGAGCAACTTCAATAATACGCCTAGCTTTGACCTTGCAATGGACACAACACCCTCATCGCATAGTTTGGAGCCTCTTCAACTCACAAGGTTGTCCCAATATGAGGAAGAGGAGGAAGAAGAAAGCAAAACCCAACAAACTTTCGACCACCATTAA 720 0.4722 MAEPQGGIGGDSGASGSKRRSTVSKRGMVAQTQDEAIVGSSPATPCGACKFLRRKCIGGCIFAPYFCTDQGAAKFAAVHKVFGASNVSKLLSNIPANRRHEAATSISYEAQARLSDPVYGCVSTILALQQQVVSLQAELAMLQTQLMNSKFFYTSALQTTQLHQPNMNAAALHPAYSNNSCGSTNLLNLSNFNNTPSFDLAMDTTPSSHSLEPLQLTRLSQYEEEEEEESKTQQTFDHH 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01177 239 ProSiteProfiles LOB domain profile. 44 146 IPR004883 -
Gma19g01177 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 14 232 - -
Gma19g01177 239 Pfam Lateral organ boundaries (LOB) domain 45 143 IPR004883 -
Gma19g01177 239 MobiDBLite consensus disorder prediction 1 26 - -
Gma19g01177 239 PANTHER LOB DOMAIN CONTAINING PROTEIN 14 232 - -
Gma19g01177 239 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01177 Gma-Chr19 40432719 40437064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01177 44 230 AS2 family AT3G03760 58.081 6.17e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma19g01177 LOB 1.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01177 - - gmx:100804332 457.603