Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01151 atGGGGAGGCCTCCTTGCTGTGACAAAGTTGGCATCAAGAAAGGTCCATGGACACCTGAGGAGGATATCATCCTTGTCTCTTACATCCAAGAACATGGTCCAGGAAATTGGAGATCAGTGCCTACTAATACTGGGTTATCAAGGTGCAGCAAAAGTTGCAGGCTTAGATGGACAAATTACCTCAGGCCAGGAATCAAGAGAGGGAACTTCACTCCCCATGAGGAAGGAATGATAATTCACTTGCAAGCTCTACTGGGTAACAAATGGGCAGCCATAGCTTCCTATCTTCCACAAAGAACAGACAATGACATAAAGAATTATTGGAACACCCATCTAAAGAAGAAGCTGAAGAAATTTCAAGCAGCCTTGGATCCACACTCAGCATCAGACTCAACAGCAAGTGGTCAGTTTCTACCAAAGAGCTTTAGTGACAGAAGAAGCTTAGACATCAGCAGCAGCAACAATAATCATGGCTCATCCATTAGGCTTAGTCATCAGTCTCAGTCCTCTTCCACAACATATGCCTCAAGCACTGAGAACATCTCAAGACTCTTGGAAGGTTGGATGAGATCTTCCCCAAAGCCACTCAAGGGATCATCATCCCAAGATGATGAAGATATTCAGCTCCAAGGCATCAATGATGATGATAAAAATAACAACAACTTTGAAAGCACTACTAAGCTAGTGAACCTTCATCATCTTCAGCACAAAGTAAGAAACAAAGATGAGCATCAAGAGGGTGGTGGTGGTGGCGTAGATAACATGGTTTCTCATGAAGAGTTTGATTCTATTTTGTCTTTTGAGAACCTTAACAATGCTGCTTGGGACAAGTCCACTTGTGATTCCATGCCAGAAAAGAGTTCTGAAGCTGCTGCTGAGTATTCTGTTGATCATCATCATGATATAGCTGCTCATGAGAGGAACAACATTAGGCAAAAATCTGAGAACAGTGGTGCTCCTCCATTGTCATTTCTTGAGAAGTGGCTCTTGGATGAAAGTGTTGGTCACCAAGTGGAGGAGATGATGGAGTTGTCTCCTATGTTCTAA 1047 0.4308 MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLSRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQAALDPHSASDSTASGQFLPKSFSDRRSLDISSSNNNHGSSIRLSHQSQSSSTTYASSTENISRLLEGWMRSSPKPLKGSSSQDDEDIQLQGINDDDKNNNNFESTTKLVNLHHLQHKVRNKDEHQEGGGGGVDNMVSHEEFDSILSFENLNNAAWDKSTCDSMPEKSSEAAAEYSVDHHHDIAAHERNNIRQKSENSGAPPLSFLEKWLLDESVGHQVEEMMELSPMF 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01151 348 MobiDBLite consensus disorder prediction 194 223 - -
Gma19g01151 348 CDD SANT 69 112 IPR001005 -
Gma19g01151 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Gma19g01151 348 CDD SANT 16 61 IPR001005 -
Gma19g01151 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Gma19g01151 348 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 339 - -
Gma19g01151 348 Gene3D - 68 134 - -
Gma19g01151 348 MobiDBLite consensus disorder prediction 146 176 - -
Gma19g01151 348 SMART sant 66 114 IPR001005 -
Gma19g01151 348 SMART sant 13 63 IPR001005 -
Gma19g01151 348 MobiDBLite consensus disorder prediction 190 223 - -
Gma19g01151 348 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Gma19g01151 348 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gma19g01151 348 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gma19g01151 348 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Gma19g01151 348 Gene3D - 13 66 - -
Gma19g01151 348 PANTHER TRANSCRIPTION FACTOR MYB60 1 339 - -
Gma19g01151 348 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01151 Gma-Chr19 40062997 40064474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01151 1 119 MYB Transcription Factor Family AT5G62470 89.916 8.20e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma19g01151 Myb_DNA-binding 1.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01151 K09422 - gmx:100817854 675.241