Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01143 ATGGAAGATCAGGGTCAGCAGCAGCAACAACAGGAGGCAAAGAGTCCAAGGCAAGGCACCGAGAGGAGTGAAGCGGTTCGGTCAAGGTGGACTCCAAAGCCAGAACAAATCCTCATTCTCGAGTCCATCTTCAACAGTGGCATGGTGAACCCTCCCAAGGACGAAACCGTCAGAATAAGGAGGCTTCTCGAGAAATTCGGCGCCGTTGGCGACGCCAACGTCTTCTACTGGTTCCAAAACCGCCGCTCGAGATCCCGCCGCCGCCAGCGCCAGATGATGCAGCAGGCTGCTGCCGCCGCCGCCGCCACCACCATTGACCACCCTCAGGCTCAGGCTCAGACTCTTGTTGGTGGTGCAATTCCACTTGATCACACCACTCAAGGAAACCTTGTTGTTGCAAGTAGTGCTACTTCAACCATGGGGTTTGGTTGTTCTTCTTCTCCATCTTACGCTTTCCTTGGTTCCTCTTCTTCATCTTGTGGTGGTGGTGTAATTGGTGGCCATCAACAAGGCATGGAGGGTTTCTTCTCAGTTTCTTCTCAAATGGGTTTCCCTGATCACCACACTTCACCTGCATCATCAGCTTTCTACCCTCCTCTTGATCCAAATTTGACGTACCAGGCTGGATATGGGGGCACTAATATTTCGGGATTCATCACAGTGTTTCTCAATGGGATTGCAACAGAACTTCCAAAGGGGCCAATAGACCTCAAAACCGTGTTCGGAGAAGATGTAATGTTAGTTCATTCCTCTGGAGTGCCAGTTCCCACCAATGAATTTGGGTTCTTGATGCAGAACCTTCGGCATGGCGAAAGCTACTTTCTGGTATCAAAGCCAACATAA 843 0.5089 MEDQGQQQQQQEAKSPRQGTERSEAVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRRLLEKFGAVGDANVFYWFQNRRSRSRRRQRQMMQQAAAAAAATTIDHPQAQAQTLVGGAIPLDHTTQGNLVVASSATSTMGFGCSSSPSYAFLGSSSSSCGGGVIGGHQQGMEGFFSVSSQMGFPDHHTSPASSAFYPPLDPNLTYQAGYGGTNISGFITVFLNGIATELPKGPIDLKTVFGEDVMLVHSSGVPVPTNEFGFLMQNLRHGESYFLVSKPT 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01143 280 MobiDBLite consensus disorder prediction 1 30 - -
Gma19g01143 280 SMART HOX_1 25 92 IPR001356 GO:0003677
Gma19g01143 280 ProSiteProfiles 'Homeobox' domain profile. 23 88 IPR001356 GO:0003677
Gma19g01143 280 PANTHER WUSCHEL-RELATED HOMEOBOX 11 2 279 IPR044558 GO:0003700|GO:0048830
Gma19g01143 280 MobiDBLite consensus disorder prediction 1 16 - -
Gma19g01143 280 Gene3D - 27 94 - -
Gma19g01143 280 SUPERFAMILY Homeodomain-like 22 94 IPR009057 -
Gma19g01143 280 Pfam Homeodomain 27 87 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01143 Gma-Chr19 39933584 39935749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01143 2 276 Wox Gene Family AT3G03660 51.228 7.40e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gma19g01143 Homeodomain 1.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01143 - - gmx:100791266 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01143 19 39933584 39935749 Gma19g01143 19 39933584 39935749 ECH