Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01142 ATGGATCACAAGATAAACTTCTTTAGCCCGAATGAGTTTCCTTTTGGGCTCACTCTCTTCACCACTTTGCCCTTCCTAAACCCTGTAGACACTTTTGCTCTCGCGACAGTCCTCACCTTCACCACTCTAACTGGTGACGGTGCTCAATCTCAGCGTCATCACTCGCAACGCAACAACCTGAAGGCCACCCACTGGCAAGAGGTTACTGATGCCATCGCAAGCCGCTGCCCCAGTGCCTCCCCTCCCAAAACCCCCATCCAATGCTGCCACAAAATGGAGAAGCTCCGCAAGCGCTACCGCACCGAGATCCAACACATTCGCTCCTTCCACGTTTCGCGATTCAACTCCTCCTTGGTCCACTTCAAGCTCATGGACTCCATGGAGAAAGAAATTACGAAGAATCACCAGATGAGAAAGAAATACACGGTCCAGCTTGGCGAGAATGAGCTTGTCCTTAAGGAACTGGATTTATTGAAAGACGATGCAAATGATTTGACAGTTGATTGGGCCAAGAATCGAATACATCTAAGCCGAATTGCAAGTGCATCATTGAAATTTACTGTATTGAATCCAAAAGGACATATATGGACAATGGTAGCAGGAGGTGGTGCGAGTGCAACTTATGTTGATACTGTTGGAGATTTAGGCTATGCATCAGAGCCTGGCAACTATGCTGAATATAGTGGAGCTCCGAATGAGGAGGAGGTGTTGCAATATGCAAGAGTTGTAATTGATGTGATCATATATAGGAACAATCTTGTTAAACTACTAGCCAAACCAAACACATGA 789 0.4639 MDHKINFFSPNEFPFGLTLFTTLPFLNPVDTFALATVLTFTTLTGDGAQSQRHHSQRNNLKATHWQEVTDAIASRCPSASPPKTPIQCCHKMEKLRKRYRTEIQHIRSFHVSRFNSSLVHFKLMDSMEKEITKNHQMRKKYTVQLGENELVLKELDLLKDDANDLTVDWAKNRIHLSRIASASLKFTVLNPKGHIWTMVAGGGASATYVDTVGDLGYASEPGNYAEYSGAPNEEEVLQYARVVIDVIIYRNNLVKLLAKPNT 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01142 262 PANTHER TRANSCRIPTION FACTOR 56 137 - -
Gma19g01142 262 Pfam ATP citrate lyase citrate-binding 179 251 IPR032263 -
Gma19g01142 262 Gene3D - 173 257 IPR016102 -
Gma19g01142 262 SUPERFAMILY Succinyl-CoA synthetase domains 180 244 IPR016102 -
Gma19g01142 262 Gene3D - 119 163 IPR009053 -
Gma19g01142 262 Pfam Myb/SANT-like DNA-binding domain 38 127 IPR044822 -
Gma19g01142 262 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 56 137 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01142 Gma-Chr19 39897823 39900588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01142 171 245 Acyl Lipid Metabolism Gene Families AT1G09430 84.211 2.19e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma19g01142 Myb_DNA-bind_4 3.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01142 K01648 - gmx:121175207 132.109