Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01137 ATGGTGTACTGCAGTCACTGTGCCAAAAATGTTGCCGGCGAGCGACTAGATGATGGTTTCTTATGTTGTGGAAGCTGTGGGAGGGTGTTGGAAGATTACTTTTTTGCTGAGGAGCCTTCATTTGTTAAGAATGCGGCAGGGCAGAGTAAATTATCAGGCAATTATGTAAGAACAGTTCAAAGTGAGTACTCTGAATCACGTCAAAGGACTTTAGATAGAGCTTATGATGAAATTAAATATTTAAGTTTTGGCCTTGGAGTTAATGATGAACATATGGCTGAACAAGCTTTGACCTTTTATAAAATAGCGCTTGAGCGAAATTTCACCCGTGGACGTAAATCAGAACAAGTACATGCTGCTTGTCTCTACATTGCATTCCGGCACAACAATAAACCATACCTTCTTATTGATTTTTCAAATTATTTAAGGACAGATGTTTATGTGCTAGGAGCAGTTTTCTTGCAGCTTTGTCAAGTGTTAAGGCTTGGAGAGCACCCAATTGTTCAAAAGCCTGTTGATCCTAGTCTTTTTATTCATAGATATACCAAGAATTTGTTAAAGCGAGGGAGTAAGGCTGTCTCTGATACTGCACTGGCCATTGTTGCAAGCATGAAACGTGACTGGATGCAGACAGGGAGGAAACCTAGCGGATTATGCGGTGCAGCATTATACATATCTGCTCTTGCTCATGGTATTAAGTGCTCTAAGCCGGATATTCTTAAAATTGTCCATGTATGTGAAGCAACATTGACCAAACGATTGGTAGAATTTGAGGATACCGAGTCTTCTAGCTTGACAGTTGAGGAGTTGAATACAATGGCAAAAGAGCATGAAAAAAATTCAATGATAATGCCAGGAGGTGGATTAAAAGGTTGTATTTCAAAAGACCTACTGTGTGAGCACAAGGAGGATAGTGGGGTGACCCATTTTGCACTTGGATTATGTGAAGCTTGCTATAAGGATTTTGATAAGCTCTCTGGTGGACTTGGTGGTGGTTTGGATCCTCCTGCATTCCAGCGTGCTGAGAGGGAAAGATTTAAAAAAACACTTCCTGAGGAGAGTGTCGATGAAGCATGTGCTTTGGCGAATGCATCAAATGATCAGTTTAAGAGCCACAAAGAAGATTTGCATGCCTATGTGCCAGAAAGTATTGGGGCTAATGTTGAGCATGAGGCCACTAAAGATGGTAAATATGATGATTCTCATAGAGAAGATGAATCAGAAACTTTATCTGATATTGATGATGAAGAAGTTGATTTGTACATTCATGATGAGGAGGGGAAGCATATCAAGAAGTTACTATGGGAAACAGCGAATCGGGAGTATCTTGAGgagcaggcagccaaggaagcagctgcagcagctaataagaaagcttttgaggcaaattttgaaaactgttcggaggatttactagcagcaagagagcttgctgcatcttctgctgaagccgtggcaaaatccagaaaggaaatgagacagaaacgagcctatgaggcaaaaaatacaaggccagctcaatctgctgcagaggcctttggccaaatgtctaataaaaaaaggAATTTGCAGGGTCTCAAATCTAAAGTCAATTTTGAACTCCTGAATGAATTGTTTGATGAAATGGAAAATACCGATGATCTCAAGAAACCGAAGAAAGTACGGTTTGATCTGCCCCTAGATAATGATGACAATATACCGTCCAAGGTTGAGGACAAAAATGAAGATGAGATGGGATTAGCGGATGAATTCGATGATGAAGGTGATATGGGGGAGATGTATCAAAATACTGAAAATATGGCTGATAAATATTTCCCTGAGGATGGTGATTTCGGCTATGATGACTATGATGATTATTACTAA 1863 0.3484 MVYCSHCAKNVAGERLDDGFLCCGSCGRVLEDYFFAEEPSFVKNAAGQSKLSGNYVRTVQSEYSESRQRTLDRAYDEIKYLSFGLGVNDEHMAEQALTFYKIALERNFTRGRKSEQVHAACLYIAFRHNNKPYLLIDFSNYLRTDVYVLGAVFLQLCQVLRLGEHPIVQKPVDPSLFIHRYTKNLLKRGSKAVSDTALAIVASMKRDWMQTGRKPSGLCGAALYISALAHGIKCSKPDILKIVHVCEATLTKRLVEFEDTESSSLTVEELNTMAKEHEKNSMIMPGGGLKGCISKDLLCEHKEDSGVTHFALGLCEACYKDFDKLSGGLGGGLDPPAFQRAERERFKKTLPEESVDEACALANASNDQFKSHKEDLHAYVPESIGANVEHEATKDGKYDDSHREDESETLSDIDDEEVDLYIHDEEGKHIKKLLWETANREYLEEQAAKEAAAAANKKAFEANFENCSEDLLAARELAASSAEAVAKSRKEMRQKRAYEAKNTRPAQSAAEAFGQMSNKKRNLQGLKSKVNFELLNELFDEMENTDDLKKPKKVRFDLPLDNDDNIPSKVEDKNEDEMGLADEFDDEGDMGEMYQNTENMADKYFPEDGDFGYDDYDDYY 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01137 620 Gene3D Single helix bin 404 453 - -
Gma19g01137 620 MobiDBLite consensus disorder prediction 577 592 - -
Gma19g01137 620 MobiDBLite consensus disorder prediction 564 620 - -
Gma19g01137 620 SUPERFAMILY Zinc beta-ribbon 2 43 - -
Gma19g01137 620 PANTHER TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT 1 543 IPR029529 GO:0000126|GO:0000995|GO:0006383
Gma19g01137 620 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 543 IPR000812 GO:0006352|GO:0070897
Gma19g01137 620 MobiDBLite consensus disorder prediction 384 414 - -
Gma19g01137 620 CDD CYCLIN 173 248 IPR013763 -
Gma19g01137 620 Gene3D - 173 265 - -
Gma19g01137 620 SMART cyclin_7 176 259 IPR013763 -
Gma19g01137 620 SMART cyclin_7 76 158 IPR013763 -
Gma19g01137 620 MobiDBLite consensus disorder prediction 388 408 - -
Gma19g01137 620 SUPERFAMILY Cyclin-like 74 162 IPR036915 -
Gma19g01137 620 PRINTS Transcription initiation factor IIB signature 16 36 IPR000812 GO:0006352|GO:0070897
Gma19g01137 620 PRINTS Transcription initiation factor IIB signature 119 138 IPR000812 GO:0006352|GO:0070897
Gma19g01137 620 PRINTS Transcription initiation factor IIB signature 213 229 IPR000812 GO:0006352|GO:0070897
Gma19g01137 620 Pfam Brf1-like TBP-binding domain 411 540 IPR011665 -
Gma19g01137 620 CDD CYCLIN 89 143 IPR013763 -
Gma19g01137 620 Gene3D - 63 164 - -
Gma19g01137 620 SUPERFAMILY Cyclin-like 172 266 IPR036915 -
Gma19g01137 620 Pfam Transcription factor TFIIB repeat 68 156 IPR013150 GO:0017025
Gma19g01137 620 Pfam Transcription factor TFIIB repeat 169 259 IPR013150 GO:0017025
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01137 Gma-Chr19 39785260 39798566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01137 1 520 Inorganic Solute Cotransporters AT2G01280 42.135 1.60e-110 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01137 K15196 - gmx:100789154 1160.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01137 19 39785260 39798566 Gma19g01137 19 39785260 39798566 ECH
Gma19g01137 19 39785260 39798566 Gma16g00321 16 3375640 3386600 GST