Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01084 ATGGAGGAGGAAAGTTCCAATTGCATCGACAACGAGAGGGATCTCATCCGCAACATCTGCATCCTAGCGCACGTCGACCACGGCAAGACCACCCTCGCCGACCACCTCATCGCCGCCGCGGGCGGCGGCGTCGTCCACCCAAAGCTCGCCGGCCGCGTCCGCTTCATGGACTACCTGGACGAGGAGCAGCGCCGCGCCATCACGATGAAGAGCTCCTCCATCCTCCTCCGCTATGCCGGCCGCTACGCGGTGAACCTCATCGACTCCCCCGGCCACATCGACTTCTGCAGCGAGGTCTCCACCGCCGCCCGACTCAGCGACGGCGCCCTCCTCCTCGTCGACGCCGTCGAAGGCGTCCACATCCAGACCCACGCCGTCCTCCGCCAGTGCTGGATCGAGCGCCTCACCCCCTGCCTCGTCCTCAACAAACTCGACCGCTTAATCACCGAGCTCAAACTTACCCCCTCTGAGGCCTACACGCGCCTCTTACGAATCGTTCACGAGGTCAACGGAATAGTCAGCGCTTATAAATCCGAAAAGTATCTCACCGACGTGGATTCCCTCCTCGCCGGAACCGGCAACGGCACCACCACCGGCGAGACCCTCGAGGACTACGATGATAACGAGGATGTTTTTCAGCCGCAGAAAGGTAATGTTATATTCGCATGCGCTTTAGATGGTTGGGGATTTGGGATTCGTGAGTTTGCGGAGATTTATGCTTCTAAGCTTGGGGCGAGTGTGAATGCCTTGCTGAGGGCGTTGTGGGGACAGAGGTATTATAACCCTAAGACGAAGATGATTGTTGGGAAGAAAGGGGTTGGGGGGAATAAGAAGCCTATGTTTGTTCAGTTTGTGTTGGAGCCCTTGTGGCAGGTGTATCAGGGGGCCTTGGAAGGGGATAAGGGGCTGGTGGAGAAGGTTATTAGGACCTTTAGTTTGTCGGTGCCGCAGCGGGAGCTGCAGAACAAGGATGTCAAGGTTGTGCTGCAGGCGGTTATGAGCCGCTGGCTTCCGCTTTCGGAGGCGGTTTTGTCCATGGTGGTTAGGTGTTTGCCGGACCCGGTGACGGCGCAGGCATTTAGGATATCCAGGTTGATTCCCAAGAGGGAGGTTATTGGGGATGTGGAGGGGGTTGAGGGTTTGGTGGAGGAGGCAGAGTTGGCAAGGAATTCGGTGGAGGAGTGTGATTGTCGGGACGAGGCTCCTTGTGTGGCTTTTGTGTCCAAGATGTTTGCTGTTCCGGTTAAGATGCTGCCTGGACACAGGGTGGAGGTTGGCAATGGTTATGGTGATGAAGGAGAGAGTGAGTCGGATGAGTGTTTTTTGGCGTTTGCTAGGATTTTTAGTGGGGTTTTGCATGCTGGGCAGAGAATTTTTGTGCTTTCTGCATTGTATGATCCGGTGAAAGGGGAGTCGATGCAGAAGCATATTCAGGAGGCTGAGTTGAAATCCCTGTATTTGATGATGGGGCAAGGGTTGAAAGTAGTGACATCTGCCAGGGCTGGGAATATTGTTGCCATTGCAGGCCTTGGGCAGCATATATTGAAGAGTGCTACTCTTTCTTCTACTAAGAACTGTTGGCCTTTTTCGAGTATGGCATTCCAAGTTGCTCCAACTTTGAGAGTTGCAATTGAGCCGTCTGATCCTGCTGATGTGGGTGCATTGCTCAAAGGCTTGAGGCTTTTGAATCGAGCAGATCCGTTTGTTGAGGTCACTGTGTCTGGAAGGGGAGAGCATGTTCTTGCTGCTGCTGGGGAAGTTCATCTTGAGAGATGCATAAAGGATTTAAAGGAGAGGTTTGCCAAGGTAAGCTTGGAGGTCTCTCCGCCTCTCGTGTCCTACAAAGAAACCATTGAGGGAGACGTATTGAACGTGATGGAAAATTTGAAAGTTCTTAGCAGGAGATCATCAGATTATGTTGAAAAAACAACACCCAATGGAAGATGTGTTGTTCGGGTGCAGGTGATGAAACTTCTACCTTCTTTGACGAAGGTGCTCGATGAAAGCTCTGATTTACTTGGAGATATTATTGGAGTAAAGTCGGGGCAAAGACCGAGTATTCTTGAAAACGATAACCCAGTTGAAGTGCTAAAAAAACGCATATTGGATGCAGTGGAGGGTGATATTTTGAGCAGGAATGAAAATGACAAGGACCATGCTGAGAAATGTAAATTGAAGTGGCTAAAGATTTTGAGGAGGATATGGGCACTTGGACCAAGGCAAATTGGTCCGAACCTTCTCTTTACTCCTGATATTAAAGCACAAAGCACCGATAGCTCTGTCTTAATACGTGGTTCTCCTCGCATATCAGAAAGGTTGGGCTTTGTGGCCGATTCTAGTATCAATGACTCAGTTGATGAGACGTCTTCAAATGCAAACTCAGCTTTATACATGGATGCCGAGCACCTTGAGAGTAGTGTTATATCTGGTTTCCAATTGGCCACTTCAGCTGGACCCTTGTGTGATGAACCTATGTGGGGTTTGGCATTTGTCGTTGAGGCACGGTTATCTCCATTTCCAGGACAGCATGATGAATCTGAAACGCACCAACAATCGGAGCAGTACGGCATATTTGCAGGGCAGGTAATTGCAACTGTCAAAGATGCTTGTAGAGCAGCTGTGGTTCAGAATAAACCACGGCTGGTGGAAGCAATGTATTTTTGTGAATTGAATACACCTACTGAATATTTGGGTCCCATGTATGCTGTACTTTCCCGAAGACGGGCCCGAGTATTGAAGGAAGAGATGCAAGAAGGTTCCCCTTTCTTCACTGTGCATGCGTATCTTCCTGTTTCTGAGAGCTTTGGTTTTGCGGATGAGCTTAGAAGGTGGACTTCTGGTGCCGCAAGTGCACTTCTTGTCCTTAGCCACTGGGAAGCACTTCCTGAGGATCCTTTCTTTGTACCTAAAACGGAAGAGGAAATTGAAGAGTTTGGAGATGGTTCTAGTGTTCTTCCAAATACGGCAAGAAAATTGATTAATGCAGTCAGACGGCGTAAGGGCCTTCCTGTGGAGGAAAAGGTAGTGCAGCATGGAACAAAGCAGAGGACACTGGCTCGTAAAGTCTGA 3069 0.5037 MEEESSNCIDNERDLIRNICILAHVDHGKTTLADHLIAAAGGGVVHPKLAGRVRFMDYLDEEQRRAITMKSSSILLRYAGRYAVNLIDSPGHIDFCSEVSTAARLSDGALLLVDAVEGVHIQTHAVLRQCWIERLTPCLVLNKLDRLITELKLTPSEAYTRLLRIVHEVNGIVSAYKSEKYLTDVDSLLAGTGNGTTTGETLEDYDDNEDVFQPQKGNVIFACALDGWGFGIREFAEIYASKLGASVNALLRALWGQRYYNPKTKMIVGKKGVGGNKKPMFVQFVLEPLWQVYQGALEGDKGLVEKVIRTFSLSVPQRELQNKDVKVVLQAVMSRWLPLSEAVLSMVVRCLPDPVTAQAFRISRLIPKREVIGDVEGVEGLVEEAELARNSVEECDCRDEAPCVAFVSKMFAVPVKMLPGHRVEVGNGYGDEGESESDECFLAFARIFSGVLHAGQRIFVLSALYDPVKGESMQKHIQEAELKSLYLMMGQGLKVVTSARAGNIVAIAGLGQHILKSATLSSTKNCWPFSSMAFQVAPTLRVAIEPSDPADVGALLKGLRLLNRADPFVEVTVSGRGEHVLAAAGEVHLERCIKDLKERFAKVSLEVSPPLVSYKETIEGDVLNVMENLKVLSRRSSDYVEKTTPNGRCVVRVQVMKLLPSLTKVLDESSDLLGDIIGVKSGQRPSILENDNPVEVLKKRILDAVEGDILSRNENDKDHAEKCKLKWLKILRRIWALGPRQIGPNLLFTPDIKAQSTDSSVLIRGSPRISERLGFVADSSINDSVDETSSNANSALYMDAEHLESSVISGFQLATSAGPLCDEPMWGLAFVVEARLSPFPGQHDESETHQQSEQYGIFAGQVIATVKDACRAAVVQNKPRLVEAMYFCELNTPTEYLGPMYAVLSRRRARVLKEEMQEGSPFFTVHAYLPVSESFGFADELRRWTSGAASALLVLSHWEALPEDPFFVPKTEEEIEEFGDGSSVLPNTARKLINAVRRRKGLPVEEKVVQHGTKQRTLARKV 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01084 1022 CDD aeEF2_snRNP_like_IV 609 887 - -
Gma19g01084 1022 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 14 247 IPR000795 GO:0003924|GO:0005525
Gma19g01084 1022 CDD EF2_snRNP_III 538 609 - -
Gma19g01084 1022 SUPERFAMILY EF-G C-terminal domain-like 536 610 IPR035647 -
Gma19g01084 1022 Gene3D Yeast translation eEF2 (G' domain) 232 337 - -
Gma19g01084 1022 PRINTS GTP-binding elongation factor signature 64 72 IPR000795 GO:0003924|GO:0005525
Gma19g01084 1022 PRINTS GTP-binding elongation factor signature 18 31 IPR000795 GO:0003924|GO:0005525
Gma19g01084 1022 PRINTS GTP-binding elongation factor signature 101 112 IPR000795 GO:0003924|GO:0005525
Gma19g01084 1022 PRINTS GTP-binding elongation factor signature 85 95 IPR000795 GO:0003924|GO:0005525
Gma19g01084 1022 PRINTS GTP-binding elongation factor signature 137 146 IPR000795 GO:0003924|GO:0005525
Gma19g01084 1022 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 352 IPR027417 -
Gma19g01084 1022 CDD EF2_II 402 523 - -
Gma19g01084 1022 Gene3D Elongation Factor G (Translational Gtpase), domain 3 537 613 - -
Gma19g01084 1022 Pfam Elongation factor G C-terminus 881 965 IPR000640 -
Gma19g01084 1022 Gene3D Translation factors 354 535 - -
Gma19g01084 1022 SUPERFAMILY Translation proteins 391 532 IPR009000 -
Gma19g01084 1022 SUPERFAMILY EF-G C-terminal domain-like 883 981 IPR035647 -
Gma19g01084 1022 PANTHER - 10 1021 - -
Gma19g01084 1022 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 10 1021 - -
Gma19g01084 1022 CDD eEF2_snRNP_like_C 883 962 - -
Gma19g01084 1022 Gene3D - 634 877 IPR014721 -
Gma19g01084 1022 Gene3D - 9 224 IPR027417 -
Gma19g01084 1022 CDD EF2 17 240 - -
Gma19g01084 1022 Gene3D - 879 1013 - -
Gma19g01084 1022 SMART EFG_C_a 880 969 IPR000640 -
Gma19g01084 1022 Pfam Elongation factor Tu GTP binding domain 16 342 IPR000795 GO:0003924|GO:0005525
Gma19g01084 1022 Pfam Elongation factor Tu domain 2 442 520 IPR004161 GO:0005525
Gma19g01084 1022 SUPERFAMILY Ribosomal protein S5 domain 2-like 612 882 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01084 Gma-Chr19 38964171 38967320 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01084 16 1022 Eukaryotic Initiation Factors Gene Family AT3G22980 70.674 0.0 1456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01084 K14536 - gmx:100775257 1952.56