Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01081 ATGATTGATCAGATTAAGCGTGAAATTTCGGTGATGAGATTAATCAGACATCCACATGTGGTTGAGCTTTATGAGGTAATGGCCAGTAAAACCAAAATTTACTTTGTCATGGAGCATGCAAAAGGTGGTGAGCTCTTCAACAAGGTAGTCAAAGGAAGGCTCAAGGTGGATGTTGCTTGGAAATATTTTCAGCAACTGATTAGTGCAGTTGACTACTGCCATAGCAGGGGTGTGTGTcatcgagatttaaaacccgaaaatctactattggatgaaaatgagaatttgaaggtttctgactttggGTTGAGTGCACTTGCTGAATCTAAGTGCCAAGATGGATTGCTCCATACTACATGTGATACCCCTGCCTATGTTGCTCCGGAAGTGATAAACAGAAAGGGCTATGATGGGATTAAAGCTGATATATATGGTCATGTGGGAATATTGGATCCAAACCCAAAGGCCAGGATATCAATGGCCAAGATTATGGAAAGTTCTTGGTTTAAAAAGGGGTTGGAGAAGCCTGCTATTACTGTAACCGAAAACGAAGAGCTAGCTCCCCTGGATGCTGATGGAATATTTGAAGCGTGCGAGAATGATGGTCCTATTGCCGAGCCTAAGCAAGAACAGGCCAAGCCTTGCAACTTAAATGCTTTTGATATTATCTCCTTCTCAACTGGTTTTGATTTATCTGGTTTGTTCGAGGACACTTTTCTCAAGAAAGAGACACGGTTTATGTCAAAGAAGCCTGCCTCAATCATAGTCTTGAAGTTAGAAGAAATTTGTAAGCAGCTTTGCTTGAAAGTAAAGAAGAAAGATCGAGGCTTGCTCAAATTGGAAGTTTCCAAGGAAGGCAGGAAAGGAACTTTGGGTGTTGATGCTGAGATTTTTGAGATTACCCCACACTTCCATATGGTGGAACTTAGAAAGTCCAATGGTGACACCATGGAGTACCAGAAGCTTTTTAAACAGGACATAAGACCAGCGCTTAAGGACATTGTTTGGACCTGGCAAGGAGAAAAACCACAGCAAGAGCAACAGCAACATGAAGTAGTCCAGGAAGAGCACCAACCTTCTCATACTGCTTAG 1092 0.3984 MIDQIKREISVMRLIRHPHVVELYEVMASKTKIYFVMEHAKGGELFNKVVKGRLKVDVAWKYFQQLISAVDYCHSRGVCHRDLKPENLLLDENENLKVSDFGLSALAESKCQDGLLHTTCDTPAYVAPEVINRKGYDGIKADIYGHVGILDPNPKARISMAKIMESSWFKKGLEKPAITVTENEELAPLDADGIFEACENDGPIAEPKQEQAKPCNLNAFDIISFSTGFDLSGLFEDTFLKKETRFMSKKPASIIVLKLEEICKQLCLKVKKKDRGLLKLEVSKEGRKGTLGVDAEIFEITPHFHMVELRKSNGDTMEYQKLFKQDIRPALKDIVWTWQGEKPQQEQQQHEVVQEEHQPSHTA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01081 363 MobiDBLite consensus disorder prediction 348 363 - -
Gma19g01081 363 Pfam NAF domain 214 272 IPR004041 GO:0007165
Gma19g01081 363 PANTHER - 1 145 - -
Gma19g01081 363 PANTHER - 149 348 - -
Gma19g01081 363 SUPERFAMILY Protein kinase-like (PK-like) 2 177 IPR011009 -
Gma19g01081 363 ProSiteProfiles NAF domain profile. 212 236 IPR018451 GO:0007165
Gma19g01081 363 ProSiteProfiles Protein kinase domain profile. 1 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01081 363 CDD CIPK_C 218 332 - -
Gma19g01081 363 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 1 145 - -
Gma19g01081 363 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 149 348 - -
Gma19g01081 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 78 90 IPR008271 GO:0004672|GO:0006468
Gma19g01081 363 SMART serkin_6 3 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01081 363 Gene3D Kinase associated domain 1, KA1 219 337 - -
Gma19g01081 363 Gene3D Transferase(Phosphotransferase) domain 1 1 218 - -
Gma19g01081 363 MobiDBLite consensus disorder prediction 341 363 - -
Gma19g01081 363 Pfam Protein kinase domain 4 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01081 Gma-Chr19 38941645 38942873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01081 1 342 CBL-interacting serine-threonine protein kinases AT5G58380 56.716 1.32e-152 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma19g01081 Pkinase 3.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01081 K07198 - gmx:100811923 661.373