Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01060 ATGGGAAACCCAGAATCCAATTTGCCACCCGGTTTTAGGTTCCACCCAACCGATGAGGAGCTCATTCTTCACTACCTTAGTAAAAAGGTAGCATCCATACCCTTGCCCGTTTCCATCATTGCAGAGGTTGATATCTACAAGTTAGATCCATGGGACTTACCAGCTAAGGCAACCTTTGGGGAGAAAGAATGGTATTTTTTTAGTCCTAGAGACCGAAAGTACCCAAATGGTGCAAGGCCAAACAGGGCAGCTGCTTCAGGTTATTGGAAGGCCACTGGCACTGATAAGACCATAGTGACATCATTGCAAGGAGGAGCACAAGAGAGCGTTGGTGTGAAGAAGGCTTTGGTGTTCTACAAAGGAAGACCCCCAAAGGGTGTGAAGACCAATTGGATCATGCATGAATATCGCCTTGTAGACAACAACAAACCCATTAAGCTCAAAGACTCCTCCATGAGATTGGATGACTGGGTTCTGTGCCGGATTTACAAGAAATCCAAACATCCTCTAACTTCAACAGAGGCATCAATAGGGGTAGGTGATGTAGATCAAGCAGAGGAGCACGTATTCAAAGAGACCCTTTTGCCAATCTCAAAATCTCCAACACCTCCACCTCAAAACACATTGATATCTCAGAAATCTGTGTCCTTCTCCAACTTGTTGGATGCCATGGACTACTCTATCCTAAGCAGTTTCTTATCTGAAAATCATACCACCCACCCACCAGGGGTTGGATCAAGTACAGGCTTCAACACTGGGAATTTGGATCAGCAACCATCTCCAATCGACAACAGCAATGGTTACATGTTTCAGAAGAACAACCCCCAATTGAACCCTTCAGTCTCCAACATGGAAAACATGATGAGGCCAAAGCGCCAAGTTTCAAACATGGATGAGGAAACCTTGTACCCATCAAAGAAATACCTTAGTTCCTCTTGCAACTTCCCTACTAACATCAACAACCAATACGAGAACCCACAATGGAACTACCTCATGAAGCAGTCTTTGCTGAATCAACGGTTAATGCTTGGTCCTCATCTTCAATTTCAAGGATAA 1056 0.4451 MGNPESNLPPGFRFHPTDEELILHYLSKKVASIPLPVSIIAEVDIYKLDPWDLPAKATFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVTSLQGGAQESVGVKKALVFYKGRPPKGVKTNWIMHEYRLVDNNKPIKLKDSSMRLDDWVLCRIYKKSKHPLTSTEASIGVGDVDQAEEHVFKETLLPISKSPTPPPQNTLISQKSVSFSNLLDAMDYSILSSFLSENHTTHPPGVGSSTGFNTGNLDQQPSPIDNSNGYMFQKNNPQLNPSVSNMENMMRPKRQVSNMDEETLYPSKKYLSSSCNFPTNINNQYENPQWNYLMKQSLLNQRLMLGPHLQFQG 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01060 351 Pfam No apical meristem (NAM) protein 9 138 IPR003441 GO:0003677|GO:0006355
Gma19g01060 351 PANTHER OS01G0104200 PROTEIN 6 301 - -
Gma19g01060 351 PANTHER NAC TRANSCRIPTION FACTOR 56 6 301 - -
Gma19g01060 351 MobiDBLite consensus disorder prediction 239 268 - -
Gma19g01060 351 SUPERFAMILY NAC domain 5 165 IPR036093 GO:0003677|GO:0006355
Gma19g01060 351 Gene3D NAC domain 17 169 IPR036093 GO:0003677|GO:0006355
Gma19g01060 351 ProSiteProfiles NAC domain profile. 8 165 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01060 Gma-Chr19 38541629 38544062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01060 3 351 NAC Transcription Factor Family AT3G04070 52.381 7.60e-111 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma19g01060 NAM 5.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01060 - - gmx:100301906 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01060 19 38541629 38544062 Gma19g01060 19 38541629 38544062 ECH