Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01050 ATGGGAGCCACTTGTCCAGAATCTCCACCACTTCTCCAAGACCTAAGGGTTACCATCCACGAAACTTCAATGGTTTTTCCATCCAAAGAAACCGAGAAGAGGTCCTTGTTCCTATCAAACATAGATAAGGTCCTCAACTTCGAAGTGGAAACGGTTCACTTCTTTGGAGCAAACAAAGATTTTCCACCCCAAAAAGTGGCCAAGATGTTCAAGAATGCTCTAGAGGATGCCCTAGTGGTCTATGACTTCTTGGGAGGAAGGTTGAATCTGAACCCCGAAACCAAAAGATTAGAGATAGATTGCAATGCAAAGGGTGCTGGGTTTGTGGTGGCTTCAAGTGAGTACAAGTTAAGTGAGATTGGCCACTTGGTTTATCCCAATCCATCTTTTGCACAATTTGTTCACAAGAGTAAGGATTTCCTTCAACAAAATGATCAACCACTATGCGTTGCACAGTTGACATCCTTCAAATGTGGAGGCTTCGCAATAGGGTTCACAACCAGCCACACCACCTTCGACGGTCTAAGCTTCAAAACATTCTTGGACAACCTTGCCGCATTGGCTGCTAACAAGCCCCTGGCTGTGATACCCTGCCACGATAGGCACCTCCTGGCCGCAAGATCTCCGCCACGTGTCAGCTTCCCGCACCACGAGCTGATCAAGCTCGATAACTTACCCACAGGCAGCACCGAGTCCAGTGTCTTCGAGGCCTCTAAGGAAGAGCTCGACTTCAAAGTTTTCCAACTAACCTCACACAACATTCTCAGCCTCAAGGAGAAAGCCAAGGGTAGCACCAATGCTCGTGCCACTGGGTTTAATGTTATCACTGCCCATATATGGAGATGCAAGGCCTTATCTGCACCCTACAACCCCTCTAGGTCATCCACCATACTATATGCCGTGGACATACGTCCACGGCTGAACCCTCCCCTCCCCAAATCCTTTGCGGGTAATGCTGTGTTAACCGCGTATGCCACAGCAAAATGCGAGGAATTGGAGAAGGGAGAGTTCTCAAGCTTGGTGGGGATGGTGACAGAGGGTGCAAAGAGAATGAGTGATGAGTATACAAGGTCTATGATAGACTGGGGAGAGGTGCATAGTGGGTTTCCACATGGGGAGGTTTTGGTGTCTTCGTGGTGGAGATTAGGCTTTGAGGAGGTGGAGTATCCGTGGGGGAAGCCTAAGTATTGTTGTCCCGTGGTGTATCACCGGAAGGACATTATTTTAGTGTTTCCTCCTTTTGGTAGTGGGGATGATGGGATAAATATTATAGTGGCTCTTCCTCCCAAGGAAATGGACAAATTCGAGACCCTCTTTTACATGTTCTTGAATTGA 1335 0.4787 MGATCPESPPLLQDLRVTIHETSMVFPSKETEKRSLFLSNIDKVLNFEVETVHFFGANKDFPPQKVAKMFKNALEDALVVYDFLGGRLNLNPETKRLEIDCNAKGAGFVVASSEYKLSEIGHLVYPNPSFAQFVHKSKDFLQQNDQPLCVAQLTSFKCGGFAIGFTTSHTTFDGLSFKTFLDNLAALAANKPLAVIPCHDRHLLAARSPPRVSFPHHELIKLDNLPTGSTESSVFEASKEELDFKVFQLTSHNILSLKEKAKGSTNARATGFNVITAHIWRCKALSAPYNPSRSSTILYAVDIRPRLNPPLPKSFAGNAVLTAYATAKCEELEKGEFSSLVGMVTEGAKRMSDEYTRSMIDWGEVHSGFPHGEVLVSSWWRLGFEEVEYPWGKPKYCCPVVYHRKDIILVFPPFGSGDDGINIIVALPPKEMDKFETLFYMFLN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01050 444 Gene3D - 224 441 IPR023213 -
Gma19g01050 444 Gene3D - 15 220 IPR023213 -
Gma19g01050 444 Pfam Transferase family 16 439 - -
Gma19g01050 444 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 13 441 - -
Gma19g01050 444 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01050 Gma-Chr19 38349454 38352817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01050 15 440 Monolignol Biosynthesis Gene Families AT5G48930 28.668 3.43e-52 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01050 K13065 - gmx:100780971 894.034