Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01048 atgGCCGTGTGCGAGAGTCTGATTCTTTCACCCAAACATACACAGAGGCTATTTTTTCAGCTATTGCCAACAATGGCTGATGGTCAATCTGACAAGAACATTGAGATATGGAAGATCAAGAAATTGATCAGAGCATTGGAATCTGCAAGAGGTAATGGCACCAGCATGATTTCTCTGATTATGCCCCCACGTGATCAAATATCTCATGTCACTAAGATGCTGGGAGATGAGTTTGGAACTGCTTCAAATATCAAAAGCAGGGTGAACTGA 270 0.4185 MAVCESLILSPKHTQRLFFQLLPTMADGQSDKNIEIWKIKKLIRALESARGNGTSMISLIMPPRDQISHVTKMLGDEFGTASNIKSRVN 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01048 89 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 25 89 IPR004403 GO:0003747|GO:0006415
Gma19g01048 89 Gene3D eRF1 domain 1 20 89 IPR024049 -
Gma19g01048 89 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 30 89 IPR024049 -
Gma19g01048 89 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 25 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01048 Gma-Chr19 38275417 38278291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01048 25 89 Eukaryotic Initiation Factors Gene Family AT3G26618 84.615 3.97e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01048 K03265 - oeu:111365395 125.176