Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01047 ATGGCAAGGAAAAAAAAGGTGACAATTGATTTTGAACCTTTCAAACCTATCAATGCATCACTTTACCTCTGTGATAACAAGTTTCACACAGAAGCTCTAAATGAACTTTTAGAATCAGATGACAAGTTTGGTTTTATTATTATGGATGGGAACGACACCCTTTTTGGGACATTAACTGGAAACACTCGTGAGGTGCTTCATAAATTTACTGTTGATCTACCAAAGAAGCATGGTCGAGGAGGGCAGTCAGCATTGTGTTTTGCTTGTCTTCGCATGGAAAAGCGGCACAACTATGTCAGGAACACTGCAGAACTTGCTACTCAGTTTTTCATCAATCCTGCTACTAGTCAACCTAATGTTTCTGGACTTATACTTGCTGGTTCAGTTGGCTTCAAGACTGAGCTGAGCCAGTCAGATATGTTCAATCCTCGTTTGCAAGCAAAAATATTGAATGTGGTTGATGTTTCCTATGGTGGGGAAAATGGTTTTAATCAAGCTATTGAGTTATCCGCGGAGATGTTATCTAATGTGAAGTTTGTTCGAGAGAAACGCTTGATCAGAAAATACTTTGAAGAGATCAGCCAGGACACTGGGAAATATGTCTTCGGAGTTGAAGCACGCTGA 624 0.4006 MARKKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIIMDGNDTLFGTLTGNTREVLHKFTVDLPKKHGRGGQSALCFACLRMEKRHNYVRNTAELATQFFINPATSQPNVSGLILAGSVGFKTELSQSDMFNPRLQAKILNVVDVSYGGENGFNQAIELSAEMLSNVKFVREKRLIRKYFEEISQDTGKYVFGVEAR 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01047 207 Gene3D - 177 206 IPR029064 -
Gma19g01047 207 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 3 205 - -
Gma19g01047 207 Pfam eRF1 domain 2 42 176 IPR005141 -
Gma19g01047 207 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 4 38 IPR024049 -
Gma19g01047 207 Gene3D eRF1 domain 2 34 175 IPR042226 -
Gma19g01047 207 Gene3D eRF1 domain 1 1 33 IPR024049 -
Gma19g01047 207 SUPERFAMILY L30e-like 176 205 IPR029064 -
Gma19g01047 207 SUPERFAMILY Translational machinery components 40 174 - -
Gma19g01047 207 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 3 205 IPR004403 GO:0003747|GO:0006415
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01047 Gma-Chr19 38274391 38275311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01047 2 205 Eukaryotic Initiation Factors Gene Family AT5G47880 89.216 4.05e-135 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01047 K03265 - gmx:106796341 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01047 19 38274391 38275311 Gma16g00402 16 4277756 4280446 GST
Gma19g01047 19 38274391 38275311 Gma16g01371 16 32659996 32668410 PCT
Gma19g01047 19 38274391 38275311 Gma02g00616 02 6069125 6073490 PCT
Gma16g01371 16 32659996 32668410 Gma19g01047 19 38274391 38275311 PCT
Gma02g00616 02 6069125 6073490 Gma19g01047 19 38274391 38275311 PCT