Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01036 ATGAGTTTTCAAGACATCCAAACTGGCCCCAACCCTTCCTCTCGCCGGAACCAGTCCCCTTCGCAGGCCGTCGCCGCCGGAATTTTCCAGATCAACACCGCCGTCGCTGCTTTCCGGCGACTCGTCGATGGTGTTGGAACCGTTAAAGACACTCCCGAACACCGTCAGAAGCTGTACCAACAAGCTAATGTAGCTACAATTGCAGAAGTGAAGACTCCAAAAACTTTGACATTGGGGCAGCAATTGCACTCTGGCTCTGGTGAAGAATCGGTTGGGATAGATGTGGAAAGCCAACCTTTTATCAGAGAGCAGAAGAGGCAAGAGATACTTCTATTGGATAATGAAATATCCTTCAACGAGGCCATGATTGAAGAAAGAGAACAGGGAATTAGAGAGGTAGAGGAGCAAATTGAACAAGCAAATGAAATATTCAAGGACCTAGCTGTTCTGGTTCATGATCAGGGTGTTGTTATTGATGACATTCATTCAAATATTGATGCTTCTGCTGGTGCTACAACCCAAGCTAGGGTACAGCTAGCCAAGGCTTCCAAAAGTGTGAAATCCAAAACCTCATGGCCCCTCAAGGCAAATCCCCTCATGTCTGGAGGGCTATTTGCAAGTTTCACACCTAGAATTGGAGATGGTGCTTCCAATATTTGGTTTCACAACTGGTCTGGATCAGGATGCTTGAGCACAAAATTTCTATATGTAGATATTCAGGATGTGGACTTAACTCTTTCTGATGTGATTCAAGATGGGAAATATAACCTGCAACGAGTGTTTCCCCAATTCTCTGTGAACAGCTTTCACTCTCGGTTAGTTGCTTGGTCCCCTCCACTCTCTGATTGGGTGGTTGTTAATGTTGATGGCAGCGTGCGGGGCCATGTTTCAGGAGATGAGGTGGTCTTCACTGAGGTATTTGTTTCCTATACCTCCAATTGCATTCCAGTAAGCTCATTTTGTAATGCTAGAATGAACTTTTCGGAATACAATGGAAGTGAAGAGAAAAGAAATGGGGAGTCTGGTGTACCAAGTAATTTCCTCCGCGGCACTTCTGACGCTGGGCATGTACCATCTGATAAGCACCACGCGCAACTACCTCAAATCGCCTCACGCCTACGCCGCCAAACCCTTCCACCCCTTCCCCTACCCCCGCCGCCTCCCGCTCTACCTAATCATACTCTCTCTCCTCCTCGCCATGGCCCACCACCTTCTCGTCTCCGCCGACGCCGATCCCCTTGTTCGCGGCGCCACCGCCACGCCTCCCCCGctctcctccccctctcccccgacctctccttcgccctcgcctccgtcctcttcctccTCCACGCCGCCCTCGCCTCCGCCCGCGCCGCCCTCCAGACCTCCGCCATCGAGGCCAAATGCCTCTCCGTCTCTGCTAACCTCTCCCACCTCTCCGCCCTCCTCTGCCTCCTCCTCGCCGCGCTCCCGCGCCTCTTCCCCGCCGACGCCGCCCTCTCCGCCACCTTCTGCCTCCGCGGGCTCTGGGCTCTCCAGAGCGGCCTCTCCCTCTACGCCGACGCCTTCATCCCCGAGGGCTGCCACCGCCTCCTCGACGTCACCAGCGGCGTCGAGGGCTCCACACAGTGCGATCTGGACGAGTCCAAGCTCCGCGCCGTCGCCATCCTTGATCTCGCATTCTTGATCCACGCCATCATCGTGGTCCTAATCGTGCTCCTCACTTATGCCCTCTTCGCCAGAAGCTTCGGCGGGAGGAGGCTCGGATCCTATGAGGCGCTCCCCACCGCGGCTTCCCCTACGGACCCCAACCACAGCCTTATTCAGATGAAGGCCTTGACTGGCACCCAGGCTTGA 1839 0.5242 MSFQDIQTGPNPSSRRNQSPSQAVAAGIFQINTAVAAFRRLVDGVGTVKDTPEHRQKLYQQANVATIAEVKTPKTLTLGQQLHSGSGEESVGIDVESQPFIREQKRQEILLLDNEISFNEAMIEEREQGIREVEEQIEQANEIFKDLAVLVHDQGVVIDDIHSNIDASAGATTQARVQLAKASKSVKSKTSWPLKANPLMSGGLFASFTPRIGDGASNIWFHNWSGSGCLSTKFLYVDIQDVDLTLSDVIQDGKYNLQRVFPQFSVNSFHSRLVAWSPPLSDWVVVNVDGSVRGHVSGDEVVFTEVFVSYTSNCIPVSSFCNARMNFSEYNGSEEKRNGESGVPSNFLRGTSDAGHVPSDKHHAQLPQIASRLRRQTLPPLPLPPPPPALPNHTLSPPRHGPPPSRLRRRRSPCSRRHRHASPALLPLSPDLSFALASVLFLLHAALASARAALQTSAIEAKCLSVSANLSHLSALLCLLLAALPRLFPADAALSATFCLRGLWALQSGLSLYADAFIPEGCHRLLDVTSGVEGSTQCDLDESKLRAVAILDLAFLIHAIIVVLIVLLTYALFARSFGGRRLGSYEALPTAASPTDPNHSLIQMKALTGTQA 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01036 612 Gene3D - 121 184 - -
Gma19g01036 612 PANTHER OS11G0534100 PROTEIN 423 612 - -
Gma19g01036 612 MobiDBLite consensus disorder prediction 403 418 - -
Gma19g01036 612 Gene3D - 9 85 - -
Gma19g01036 612 MobiDBLite consensus disorder prediction 378 402 - -
Gma19g01036 612 MobiDBLite consensus disorder prediction 377 420 - -
Gma19g01036 612 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 120 182 IPR000727 -
Gma19g01036 612 SUPERFAMILY t-snare proteins 19 175 IPR010989 GO:0016020|GO:0016192
Gma19g01036 612 Pfam Family of unknown function (DUF716) 431 571 IPR006904 -
Gma19g01036 612 Coils Coil 123 150 - -
Gma19g01036 612 SMART tSNARE_6 115 182 IPR000727 -
Gma19g01036 612 MobiDBLite consensus disorder prediction 332 365 - -
Gma19g01036 612 MobiDBLite consensus disorder prediction 1 22 - -
Gma19g01036 612 CDD SNARE_Qa 123 181 - -
Gma19g01036 612 PANTHER OS11G0534100 PROTEIN 423 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01036 Gma-Chr19 38067472 38073208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01036 1 192 SNARE and Associated Proteins AT5G16830 39.615 4.22e-42 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01036 - K08488 gmx:100777421 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01036 19 38067472 38073208 Gma16g00413 16 4391076 4392118 GST