Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01014 ATGGCCAATGCCATTTTGAATCCGGCACCACCATCGTTTGGAGTAGAGGAAGACGAAAGCATGCACGAACTGTGGTTGTGGCTCCATGAGAACCGCCGCAGCTCTTGCGAGAACTGCCTGGCCTTCGCAACCACCTTGGCTTTCAGCTCTTGCGAGAACTGTCAAAATCCTCTTGATGAGCTCCTACGACGCTTGAGCCAAGGGGAAGAAGCTTCTCAATTTTCCTTTATACATCCAATCAATAATACTAGTGATGATAGCACCCCTTCCACACCAATTCCACAATATGGGCAAATAAGCAATTCTTGCTTGATTGAGACTCAGGACCCATCCCAACAGCCTTTAAATCAAGGCAATGGGAGAAAAAGACACTATAGAGGAGTTAGGCAGAGACCGTGGGGTAAATGGGCTGCCGAAATCCGCGACCCTAAAAAGGCTGCTAGAGTGTGGCTTGGCACGTTTGACACGGCAGAGGCTGCTGCTGCTGCTTATGATGCTGCTGCTTTGAAGTTCAAAGGCTCTAAAGCCAAGCTCAATTTCCCAGAACACGTTCTTGTTCCTCCTCCTCCAATATCATCATCACCTTATAATAATAATCATCAAAATAATCATAGTTATTGTTATGGTTCTTCAGCTCTTGCACCACCACCTCCACTACCACTACCATCATCACAACACGTTTATGATCAACCACAACAACCCTTGTTATCATCATCATCACAAGAAGAAGGGTTTCCAAATCTAATGCAGTACGCGCAGCTTCTTTGGAGTAGGGATGATGATGATCTACAACGTGTTGCTTCAGGCCTtcatcatcaacaacatcatcatcatcatcatcatcCCAATGAAGCTTTCTATGATTCAAGTTCTTCAACTTTGTTCTCATCATCGTCCACTACTTCTTCTATGGCTGTGTCTGATCAACAGCAGATTGGAGATGACACGAGTACTGCTCCCAAAAGGGGAGAATATTATGACTCTTGCTTTTTTAGAGGGAATGATTTTCATGACAAGAATTGA 1023 0.434 MANAILNPAPPSFGVEEDESMHELWLWLHENRRSSCENCLAFATTLAFSSCENCQNPLDELLRRLSQGEEASQFSFIHPINNTSDDSTPSTPIPQYGQISNSCLIETQDPSQQPLNQGNGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAAAYDAAALKFKGSKAKLNFPEHVLVPPPPISSSPYNNNHQNNHSYCYGSSALAPPPPLPLPSSQHVYDQPQQPLLSSSSQEEGFPNLMQYAQLLWSRDDDDLQRVASGLHHQQHHHHHHHPNEAFYDSSSSTLFSSSSTTSSMAVSDQQQIGDDTSTAPKRGEYYDSCFFRGNDFHDKN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01014 340 SMART rav1_2 124 187 IPR001471 GO:0003700|GO:0006355
Gma19g01014 340 PANTHER AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR-LIKE PROTEIN ISOFORM 2 85 325 - -
Gma19g01014 340 CDD AP2 124 183 IPR001471 GO:0003700|GO:0006355
Gma19g01014 340 MobiDBLite consensus disorder prediction 208 243 - -
Gma19g01014 340 ProSiteProfiles AP2/ERF domain profile. 124 181 IPR001471 GO:0003700|GO:0006355
Gma19g01014 340 PANTHER DNA-BINDING DOMAIN 85 325 IPR044808 GO:0003700|GO:0009873
Gma19g01014 340 MobiDBLite consensus disorder prediction 225 243 - -
Gma19g01014 340 MobiDBLite consensus disorder prediction 269 324 - -
Gma19g01014 340 MobiDBLite consensus disorder prediction 286 317 - -
Gma19g01014 340 Gene3D AP2/ERF domain 123 183 IPR036955 GO:0003700|GO:0006355
Gma19g01014 340 SUPERFAMILY DNA-binding domain 124 182 IPR016177 GO:0003677
Gma19g01014 340 PRINTS Ethylene responsive element binding protein signature 147 163 IPR001471 GO:0003700|GO:0006355
Gma19g01014 340 PRINTS Ethylene responsive element binding protein signature 125 136 IPR001471 GO:0003700|GO:0006355
Gma19g01014 340 MobiDBLite consensus disorder prediction 108 128 - -
Gma19g01014 340 Pfam AP2 domain 124 173 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01014 Gma-Chr19 37676022 37678989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01014 108 184 AP2-EREBP Transcription Factor Family AT5G61890 80.247 7.20e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma19g01014 AP2 2.1e-14 CL0081