Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01010 ATGGTTCTGCAGTCTCTGGACGACGTTGTTCACCAGCACTTGATGGTTTCTACCAGGGCAGATAAGAGTCCGGGATCCAAAATCGTCGTAGCGAATGGCGGGAACGGAGCTAAGGCTGAGAAGAAGCGAAGAGAATCGGAGGATTCCATAATGCCGCTGCCGCGGAGGTCGAGTGCGAGGATTCAAGCGTTGCAGAAGGCGGAGGAGCTTTTTGCTCGTAAAAGAGTAGAGGGAGTTGAGGAGAAAGATAACTGTGACGACAACTTGACACCGGAGAAGGTGAAGGTAAAGAAGAGGAATAGAAAAAGTAGTGGCAGTGAGGAGAGTGTAGTGGTGGAAGTAGAGTTTGTTTCGCCGGCAAAGAAAAAGCGGGTTGCCTACCGCAAGTGTAAGGTGGTGGGagaaatgaatggaaatggtaaaggtgaagaattgagtggaaatggtaaggtgaGAAAAGTGAATGCGAAGGAGGAATTGGAAAATGCGGGAGGGGGTTTGGGGGAGAAGAGTGACTTGCTTAAGGTCAAAGAGACGATAAGACTGTTTACTAAGCATTACCTTCAATTAGTTCAGGAAGAAGAAAAGAGGTGTGGGAAGGCAGAGGCTGAGCGAAAAGTTGCTAAAAAGGCCTCTAAAAAGGCTTCAAAATTGAAGAAAGGTGCTCCAACTGAAGAATCAAAGAGCACTGCTAAACGACCAGATCTAAAGGCCATAAGCAAGATGATGGAAAATAATGAGATATTGTATCCTGAGAAAAGAATTGGCAACATTCCAGGTATTGAGGTTGGATATCAGTTCTATTCTCGTGCTGAAATGGTTGCAGTTGGCTTTCATAGCCACTGGTTAAATGGCATTGATTATATGGGCCAGAGCTATGCCAAAGCGTGCAGCTATGAACTTCCAGTTGCTGTTGCCATTGTTATTTCGGGCATGTATGAGGATGATCTGGATAATGCTGAGGATGTTGTGTACACTGGTCAAGGTGGGCATAATCTGACTGGTGATAAGCGTCAAATTCGGGATCAAAAGTTGGAGCGTGGTAACCTGGCTCTCAAGAACTGTGCTGAGCAATGTGTGCCTGTTAGAGTCATTCGTGGTCACGAATCTTCAAGCAGTTACACTGGTAAAGTATACACATATGATGGCTTGTACAAGGTTGTCAATTATTGGGCAGAAAAGGGAATATCTGGATTTACAGTCTACAAGTTTAGACTTAGGAGGCTCGAAGGGCAACCTACATTAACCACAAATCAGGTATATTTTACTTATGGACGTGTACCTCAAACTCTAACAGAAATACGAGGATTGGTTTGTGAGGATATCACTGGAGGTCAAGAAGATATGCCCATTCCGGCTACAAATTTGGTTGATGACCCCCCTTTTTTTTATATTTTAGGTTTCACATATTGTAAGTCTGTTAAGGTTGCAAAAAATGTGAAGCTTCCCATGAATGCCACTGGATGCGAATGTAAAGGCATTTGTAATGACCCAACAACCTGTGCATGTGCATTGCGTAATGGCTCTGATTTTCCCTATGTATCTCGGGATGGTGGCAGGTTAGTTGAAGCTAAAGATGTAGTATTTGAATGTGGTCCGGAATGTGGTTGTGGGCCAGGTTGTGTGAACCGAACTTCTCAAAGAGGACTTAGATATCGTCTGGAGGTTTTCCGTACTGCAAAAAAAGGATGGGCTGTTAGATCCTGGGATTTTATACCTTCTGGAGCACCTGTGTGTGAGTACACAGGAATACTTGCCAGGGCAGAGGATATGGATAGCGTTTTAGAAAATAATTATATCTTTGAGATAGATTGCTTGCAAACTATAAAGGGGCTAGGGGGAAGAGAGCGGCGGTCACAAGACGGAGACATTCCTGCAAATCTTTTGGACAAATATCATGATCAATGTTCTGAAAGTGCGCCAGAGTTTTGTATTGATGCAGGATCTACTGGAAATATTGCTAGGTTTATAAACCATTGTTGTGAGCCTAATCTGTTTGTTCAATGCGTTTTGAGCACACACAATGATTTGAGATTGGCTCGTGTAATGCTGTTTGCTGCTGACAACATACCCCCTTTGCAGGAATTAACGTATGACTATGGTTATGTGCTTGATAGCGTCTTGGACTCTGATGGGAAGATCAAGCAAATGCCAT 2155 0.4288 MVLQSLDDVVHQHLMVSTRADKSPGSKIVVANGGNGAKAEKKRRESEDSIMPLPRRSSARIQALQKAEELFARKRVEGVEEKDNCDDNLTPEKVKVKKRNRKSSGSEESVVVEVEFVSPAKKKRVAYRKCKVVGEMNGNGKGEELSGNGKVRKVNAKEELENAGGGLGEKSDLLKVKETIRLFTKHYLQLVQEEEKRCGKAEAERKVAKKASKKASKLKKGAPTEESKSTAKRPDLKAISKMMENNEILYPEKRIGNIPGIEVGYQFYSRAEMVAVGFHSHWLNGIDYMGQSYAKACSYELPVAVAIVISGMYEDDLDNAEDVVYTGQGGHNLTGDKRQIRDQKLERGNLALKNCAEQCVPVRVIRGHESSSSYTGKVYTYDGLYKVVNYWAEKGISGFTVYKFRLRRLEGQPTLTTNQVYFTYGRVPQTLTEIRGLVCEDITGGQEDMPIPATNLVDDPPFFYILGFTYCKSVKVAKNVKLPMNATGCECKGICNDPTTCACALRNGSDFPYVSRDGGRLVEAKDVVFECGPECGCGPGCVNRTSQRGLRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGILARAEDMDSVLENNYIFEIDCLQTIKGLGGRERRSQDGDIPANLLDKYHDQCSESAPEFCIDAGSTGNIARFINHCCEPNLFVQCVLSTHNDLRLARVMLFAADNIPPLQELTYDYGYVLDSVLDSDGKIKQMP 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01010 718 MobiDBLite consensus disorder prediction 24 50 - -
Gma19g01010 718 SMART G9a_1 251 412 IPR003105 -
Gma19g01010 718 SMART set_7 552 707 IPR001214 GO:0005515
Gma19g01010 718 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 70 718 - -
Gma19g01010 718 SUPERFAMILY PUA domain-like 238 428 IPR015947 -
Gma19g01010 718 ProSiteProfiles SET domain profile. 552 701 IPR001214 GO:0005515
Gma19g01010 718 Coils Coil 191 211 - -
Gma19g01010 718 MobiDBLite consensus disorder prediction 218 234 - -
Gma19g01010 718 Pfam SET domain 563 701 IPR001214 GO:0005515
Gma19g01010 718 Pfam Pre-SET motif 443 544 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma19g01010 718 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 102 718 IPR025794 GO:0016571
Gma19g01010 718 ProSiteProfiles YDG domain profile. 256 408 IPR003105 -
Gma19g01010 718 MobiDBLite consensus disorder prediction 209 234 - -
Gma19g01010 718 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 70 718 - -
Gma19g01010 718 SMART preset_2 439 536 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma19g01010 718 Gene3D - 239 424 IPR036987 -
Gma19g01010 718 ProSiteProfiles Pre-SET domain profile. 487 549 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma19g01010 718 Pfam SAD/SRA domain 255 412 IPR003105 -
Gma19g01010 718 SUPERFAMILY SET domain 435 704 IPR046341 -
Gma19g01010 718 Gene3D SET domain 425 706 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01010 Gma-Chr19 37567440 37602142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01010 242 717 EF-hand Containing Proteins AT5G13960 66.457 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma19g01010 SAD_SRA 5.3e-51 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01010 K11420 - gmx:100796701 1370.53