Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00989 ATGGTTCCGTTTGGGAAAGCAACATTCTTCCCAGGTCGTTTGATTCACACCAATGAGTTCCTGGTTCTTTTGGGAGAAGGATATTATGCTGAGAGAACTTCGAAGCAAACCGTTGAGATTTTACAGCGAAGAGGGAAGTCCTTGGATTCGCGGGTTGATTCTCTTGAGGCCAATATCAAGGACCCTGAAGCAGAGGCTTCATTTCTCAATGCCACGGCTTCATTTTTGACCCAGGAAGGAAGGATTATGGTAGGACTACCATCTGGGGAGAACACGGAAAAGATTTTGAGGAATCTTTTGGCAAAAGAAAAGGTGGTCAACGAAGTTGAGTTTAAGGAACTTGCAACTATGACGGAAGGATATACTGGAAGTGATCTAAAGAACTTGTGCACAAATGCTACTTATCGGCCTGTTAGAGAGCTAATTCATCAAGAGAGGCTAAAGAGTCTGtga 453 0.4349 MVPFGKATFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILQRRGKSLDSRVDSLEANIKDPEAEASFLNATASFLTQEGRIMVGLPSGENTEKILRNLLAKEKVVNEVEFKELATMTEGYTGSDLKNLCTNATYRPVRELIHQERLKSL 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00989 150 Pfam AAA+ lid domain 109 144 IPR041569 -
Gma19g00989 150 SUPERFAMILY Prefoldin 1 70 - -
Gma19g00989 150 PANTHER RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3 1 74 - -
Gma19g00989 150 PANTHER UNCONVENTIONAL PREFOLDIN RPB5 INTERACTOR 1 1 74 - -
Gma19g00989 150 Coils Coil 38 58 - -
Gma19g00989 150 Pfam Prefoldin subunit 1 78 IPR004127 -
Gma19g00989 150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 142 IPR027417 -
Gma19g00989 150 Gene3D - 1 82 IPR009053 -
Gma19g00989 150 Gene3D - 87 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00989 Gma-Chr19 37264688 37272371 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00989 74 147 Calmodulin-binding Proteins AT3G56690 33.333 2.28e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00989 K17560 - gmx:100814493 151.369