Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00984 ATGGCGAGCAGGTACTGGGCAGTGTCTCTTCCCGTCCACAACTCGGCATCATCTCAGCTCTGGAACCAATTGCAGGAACGAATCTCCAAGCATTCCTTCGACACACCTCTCTACAGATTCAACATTCCCAACCTCCGCGTCGGAACCCTAGACTCTCTCCTCTCCCTCAGCGATGACCTCGCCAAGTCCAACAATTTCGTCGAAGGAGTCACGCACAAGATCAGGCGCCAGATTGAGGAgctcgagagagtttccggcatcgacagcggcgccctcaccgtcgatggtgtccccgtcgattcctacttgaccagGTTTGTTTGGGATGAGGCAAAGTACCCGACCATGTCGCCTTTGAAGGAGATCGTGGATGGTATTCACAGTCAAGTGGCAAAGATCGAGGATGATCTCAAGGTTCGTGTTTCTGAGTATAACAATATCCGCAGTCAGCTTAATGCTATCAACCGAAAGCAAACAGGAAGCTTAGCAGTCCGTGATCTTTCCAACTTGGTAAAACCTGAAGACATTGTAACTTCAGAAAATTTAACTACCCTCCTTGCAATTGTTTCCAAGTATTCACAGAAGGATTGGCTCTCAAGCTACGAAACATTGACAAACTATGTGGTCCCCAGGTCTTCTAAGAAGTTGTATGAGGATAATGAATATGCTCTTTATACTGTAACACTCTTCAGTCGTGTTGCGGATAATTTTAGAACTAGTGCACGCGAAAAAGGATTCCAAATTCGTGACTTTGAATACAGTCCAGAAACACATGAGAACCGAAAGCAGGAATTAGATAAATTGGTACAAGATCAGGAAAGATTGAGGACTTCTCTGTTGCAATGGTGCTATACCAGCTATGGAGAGGTTTTCAGTTCCTGGATGCACTTTTGTGCTGTGCGTTTATTTGCTGAGAGCATTCTGAGATATGGTCTGCCTCCATCCTTCTTGGCATGCGTTTTAGCTCCTTCTGTAAAATCCGAGAAGAAAGTACGTTCTATCCTTGAAGGGTTGAGTGATAGCACAAACAGGCAAGTCTATGATGTCCGTGCATACTGGAAGAATGAGGATGAAGTAGGTGCCGGTATGGCTGGCCTAGCAGGTGATGCCGATGGCCACCCGTACGTTTCTTTCACTATCAATCTTGCTTGA 1152 0.4253 MASRYWAVSLPVHNSASSQLWNQLQERISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLAKSNNFVEGVTHKIRRQIEELERVSGIDSGALTVDGVPVDSYLTRFVWDEAKYPTMSPLKEIVDGIHSQVAKIEDDLKVRVSEYNNIRSQLNAINRKQTGSLAVRDLSNLVKPEDIVTSENLTTLLAIVSKYSQKDWLSSYETLTNYVVPRSSKKLYEDNEYALYTVTLFSRVADNFRTSAREKGFQIRDFEYSPETHENRKQELDKLVQDQERLRTSLLQWCYTSYGEVFSSWMHFCAVRLFAESILRYGLPPSFLACVLAPSVKSEKKVRSILEGLSDSTNRQVYDVRAYWKNEDEVGAGMAGLAGDADGHPYVSFTINLA 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00984 383 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 383 IPR004907 GO:0033180|GO:0046961|GO:1902600
Gma19g00984 383 Gene3D - 164 252 - -
Gma19g00984 383 CDD V-ATPase_C 5 380 IPR004907 GO:0033180|GO:0046961|GO:1902600
Gma19g00984 383 Gene3D - 42 313 - -
Gma19g00984 383 Pfam V-ATPase subunit C 5 376 IPR004907 GO:0033180|GO:0046961|GO:1902600
Gma19g00984 383 Gene3D Vacuolar atp synthase subunit c; domain 1 7 335 - -
Gma19g00984 383 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 383 - -
Gma19g00984 383 SUPERFAMILY Vacuolar ATP synthase subunit C 2 382 IPR036132 GO:0015078|GO:0033180|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00984 Gma-Chr19 37218052 37223667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00984 1 383 Primary Pumps ATPases(2) AT1G12840 82.245 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00984 K02148 - gmx:100813963 725.702