Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00981 ATGATGATGGATCAGCGACAGCGAGAGAAGCTGCTTCACAAAACCGAGGCCTGTGCTTTCGTGGCAGGTGTTGTTCCGGAGCTTTCCCTTGTCACCGTTCCAGGGaacaacaccaacaacgttaacaacaacaacaacgttGTTTCTCATTCTCAATCTAACGGGTCGGGTCGGATCCAGGAAAACAACCACCACCTTGGACTCGTTGCTGCTGTCACCTCCGCCTTCGGTACCGTTCAAAGGAAGAAAAGGATGGCGAGACAAAGAAGATCCACTAAACCCACTTCGTTGATGAACCATCTCAACAACCATAAGCACAACAAGCCTCGTTCTCTTCCTTCTCCCAGTGCATCCTCCTCGTACGTGCCACTCTCCTCCGCAACTCTCCAGCCCGCACGTGAAATCGATCAAAGAAGGTTGAGATTCCTTTTCCAGAAGGAGTTAAAGAACAGTGATGTTAGCTCCCTTAGGAGAATGATATTGCCAAAGAAAGCAGCAGAGGCTTTCCTTCCAGCTCTTGAATCCAAAGAAGGAATTGTAATCAGCATGGATGATATAGATGGTCTTCATGTATGGAGTTTCAAGTACAGGTTTTGGCCTAACAACAACAGTCGGATGTATGTACTTGAAAATACTGGAGATTTTGTCAACACACATGGCCTTCGCTTTGGAGATTCCATTATGGTTTACCAAGATAGTGAAAACAACAATTATGTTATTCAGGCCAAAAAGGCTTCTGATCAAGATGAATTTATGGAAGAAACTAGTGATACCATCAATGATATCTTCCTTAATGATTATGAGGTGAACAAACCTGGTTGCTTCAATGTAACTAATCCTGCAGTGAATGATACAGGCATGTCATTCATATATGAGACTACCTTCTCAAATGACTCCCCTCTTGATTTTTTGGGTGGATCAATGACCAATTTTTCAAGGATTGGGCCAGTTGAAACCTTTGGCTCTGTTGAGAATTTGTCACTTGATGACTTCTATTAA 999 0.4214 MMMDQRQREKLLHKTEACAFVAGVVPELSLVTVPGNNTNNVNNNNNVVSHSQSNGSGRIQENNHHLGLVAAVTSAFGTVQRKKRMARQRRSTKPTSLMNHLNNHKHNKPRSLPSPSASSSYVPLSSATLQPAREIDQRRLRFLFQKELKNSDVSSLRRMILPKKAAEAFLPALESKEGIVISMDDIDGLHVWSFKYRFWPNNNSRMYVLENTGDFVNTHGLRFGDSIMVYQDSENNNYVIQAKKASDQDEFMEETSDTINDIFLNDYEVNKPGCFNVTNPAVNDTGMSFIYETTFSNDSPLDFLGGSMTNFSRIGPVETFGSVENLSLDDFY 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00981 332 ProSiteProfiles B3 DNA-binding domain profile. 144 246 IPR003340 GO:0003677
Gma19g00981 332 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR FUS3 38 332 - -
Gma19g00981 332 SMART B3_2 144 246 IPR003340 GO:0003677
Gma19g00981 332 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 38 332 IPR044800 GO:0003700
Gma19g00981 332 MobiDBLite consensus disorder prediction 91 125 - -
Gma19g00981 332 Pfam B3 DNA binding domain 144 242 IPR003340 GO:0003677
Gma19g00981 332 MobiDBLite consensus disorder prediction 79 125 - -
Gma19g00981 332 Gene3D - 140 258 IPR015300 -
Gma19g00981 332 SUPERFAMILY DNA-binding pseudobarrel domain 142 241 IPR015300 -
Gma19g00981 332 CDD B3_DNA 142 244 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00981 Gma-Chr19 37206645 37209916 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00981 48 332 B3 DNA Binding Superfamily AT3G26790 51.411 8.59e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gma19g00981 B3 1.4e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00981 - - gmx:100813055 611.298