Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00956 ATGGAGATCATAAACCCTATCACCAAGGAAAAGACCTATGTGTTTCCTGTTGGATATAAGTTCGATCCAAATGATGATGATCTCGTGAGTTACTACCTGAGGAAGAAGATCATACGTGAACAACTCCCTGAAAAACTCATTCAAGAGTCTGATGTGGTTGGAACTGAGCCTTGGGGACTGCCAGGAGATGAGCTCGCCAGACTAAGATCCGACCTCGTCGGCATGGAGGAATCAAAGAAAGGTTGA 246 0.4512 MEIINPITKEKTYVFPVGYKFDPNDDDLVSYYLRKKIIREQLPEKLIQESDVVGTEPWGLPGDELARLRSDLVGMEESKKG 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00956 81 Gene3D NAC domain 24 79 IPR036093 GO:0003677|GO:0006355
Gma19g00956 81 Pfam No apical meristem (NAM) protein 16 64 IPR003441 GO:0003677|GO:0006355
Gma19g00956 81 SUPERFAMILY NAC domain 12 63 IPR036093 GO:0003677|GO:0006355
Gma19g00956 81 ProSiteProfiles NAC domain profile. 15 81 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00956 Gma-Chr19 36703149 36706907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00956 5 61 NAC Transcription Factor Family AT5G39820 38.596 8.05e-11 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma19g00956 NAM 4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00956 - - gmx:100807171 78.1814