Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00949 ATGGCAGACCCAACAGTTATTTATGAGTTTTTCAAGAAGCAGCCCTCAAACAGTGGTGGTGGAAAGAGAGCAGCAGCACCCTCCTCCGCCACCGCCACCACCCGCTCCTTCCAATGCCACTTCTGCCACCGCAAGTTCTACACCTCGCAAGCCCTCGGCGGCCACCAGAACGCCCACAAGCTCGAGCGCGCCGCCGCTAGGAGATCATCCACCAACGCCAACCTCGACCTCAACGTCAACGTCGTCACTGCTGCTGCTGCTAACGGACCTCTCCGGCTTCCCGTGGAGCCCACCGAGCCCAAGCCTAGGCCCATGCTGGAGCCCACTTCCTCCCCCACCGAGCTCTTTTTCCACCACCACCCCCCTCCTTACTGGCTCGATGTGGAGCCCTTGCAGTTTCATCACCACCACACTACACCACCTCTTTCTTCGTTCCACGCTGCTGCTGCTGCTGCGGCGGCGGCGGCGGCGTCTTCCGCACCGCACCAACAAGTTGTTCTCTCCGGCCACAACGTCAACGACGCTTCTTCCGACCACGTCAACCTCGACCTCACCCTCCGCTTGTGA 567 0.612 MADPTVIYEFFKKQPSNSGGGKRAAAPSSATATTRSFQCHFCHRKFYTSQALGGHQNAHKLERAAARRSSTNANLDLNVNVVTAAAANGPLRLPVEPTEPKPRPMLEPTSSPTELFFHHHPPPYWLDVEPLQFHHHHTTPPLSSFHAAAAAAAAAAASSAPHQQVVLSGHNVNDASSDHVNLDLTLRL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00949 188 MobiDBLite consensus disorder prediction 91 110 - -
Gma19g00949 188 ProSiteProfiles Zinc finger C2H2 type domain profile. 37 64 IPR013087 -
Gma19g00949 188 SUPERFAMILY beta-beta-alpha zinc fingers 34 64 IPR036236 -
Gma19g00949 188 ProSitePatterns Zinc finger C2H2 type domain signature. 39 59 IPR013087 -
Gma19g00949 188 Gene3D Classic Zinc Finger 22 87 - -
Gma19g00949 188 PANTHER ZINC FINGER PROTEIN KNUCKLES 17 188 - -
Gma19g00949 188 PANTHER ZINC FINGER PROTEIN JAGGED 17 188 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00949 Gma-Chr19 36538460 36539026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00949 32 69 C2H2 Transcription Factor Family AT5G14010 76.316 9.11e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00949 - - gmx:102659862 348.977