Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00945 ATGGAGAATCATGATAATAACCTTGCAGAGAATGAGAATTCGGGCACTAACGAAACCGAAGAGACGCTACCTTCTTCTTCTTCTTCGATCACCGATCATGAAGAAGCCGATCCCAAACCTGATGATGATGTTGCTGCTGCTACCACCGCCGAAGCAGAACCACCATCTCCAaagaaagatgatgaggaggcagaggaagagaagaaagaagaaactgctgcatctcctgcttctcctccgccAAGCCTCGAGAATGTTTCAGAGGAGATTGACCAGTTTCTCGTGACTCTGAAGCAGAAAAATGATGAAAATGCTGCGGAGAAGATGGATTTTGAGATTCCTGGCTTTTTTGAGAGGTACTCGGATCTGGTGGAGAAGAAGATAGCGAAATACGATGCGAAAGGGAAGGCAAAATGGGGAGAGGTGGCGGAGGAAGATTCGTGGTTGCTTGAAACCGCGAATCGGATTTCGAAGCTGATCATGTTGATGAAAGATCATCATCATGTTGAACCAGAGGAGAAAGAGATCGACGGTGGAAATGGAAATGGAAAAGACTCGCTGGTGAATCGCGTTACCTCGATTCACCAGCGTGTGATGTCGTATTTGGAGGAGGACTTCAGATTTCTAATGGAAGAATGTAGAATCCCAACCGAATTGGATCCAGGAGGCAATAATAATAACAACAACGACACCAAAGGGAAACAACAACAACAGGTGCCATCATCGGAACAAGAAGAAGTGAAAGATCAAGAAGGCGAAATCGACGAAAGTTTCCCGGGTTATTCTGATGAGACCATTGCCAGCCTGAGCAAGATCGCCGGCGAGATGATATCCGGCGGCTACGAATCGGAGTGCTGCCAGGTGTACATCATCTCGCGGAGGAACGCGTTCGAGGAGGTTCACAAGAAGCTAGGGCTGGAGAGGATCAGCATCGACGACATGGTTCTAAAGGTGCAGTGGGAGACTCTGGCCGGGAACATGATTCCAGCCTGGATCAACACGCTCAAGCAGTGCGCGGCGGTGTACTTCCCCGGCGAGCGGAAGCTCGCCGAGGCCGTGTTCGCCAGCTGCCCCTCGGTCGCGGCGGGGCTCTTCGGCAGCCTCTCCCGCGGCGTGGTGATCCAGCTCCTCAACTTCGCGGAGGGAGCCGCTATGACGAAGCGCGCCGCCGAGAAGCTCTTCAAGCTCCTCGACATGTACGAGACCCTCCGTGAGATCATCCCCAAGGTGAACGGGCTATTCCCGGAGGAGTCTGTCGAGGAGCTGAAGACGGAGATGAATATCGCCAAGTCACGACTTGGCGAGGCGGCCATCTCCATCTTCTGCGATCTGGAGAACCAGATCAAACAGGAGACCGCGAGAACCGCGGTCCCGGGTGGCGCAGTGCACCCCCTAACACGCTACATAATGAACTACCTCAGCGTGGCGGGAGATTACAAGGAAACCCTAGAGCAAGTCTTCAAAGACCACTCCAAGATCGAACGTGCAGACTCCACCAGTAGGCCACACAACGAGAACGACGGCGTGCCGGAGAAGCAAGCATCGTCGCCGTTCGCGGCGCAGGTGCTGAGAGTCATGGACTTGCTAGACTCAAGCCTAGAAGGCAAAGCTCGTTTATACAAAGACGTGGCGCAGAACAATTTCTTCATGATGAACAACGGAAGGTACATTCTGCAGAAGATAAAAGGATCAAGCGAGATGAGCCAGGTGATGGGTGACACGTGGATCAGGAAGAAATCCTCTGAGCTGAGAACATACCACAAGAACTACCAGAGAGAAACGTGGAATAGGGTTCTGGCGTGTCTGAACCCGGAAGGGTTGAACGTGAACGGGAAGGTGCAGAAGCCGGTGCTGAAGGAGAGGTTCAAGAGCTTCAACTCGTTGTTTGATGAGATACACAGGACGCAGAGCTCGTGGGTGGTGAAGGACGAGCAGCTTCAGTCGGAGCTTAGGGTTTCGATCTCGGGAGTGGTGGTTCCGGCGTACAGGGCCTTCATTGGGAGGTTTGCGCAGATCTTTGACCCGGGAAGACAGACTGAGAAGTACATAAAGTACCAACCTGAAGATATTGAGACTTACATTGATGAGTTGTTTGATGGGAAGCCTCATCAGTCCATTGCTAGGAGGAGAACATAA 2136 0.5037 MENHDNNLAENENSGTNETEETLPSSSSSITDHEEADPKPDDDVAAATTAEAEPPSPKKDDEEAEEEKKEETAASPASPPPSLENVSEEIDQFLVTLKQKNDENAAEKMDFEIPGFFERYSDLVEKKIAKYDAKGKAKWGEVAEEDSWLLETANRISKLIMLMKDHHHVEPEEKEIDGGNGNGKDSLVNRVTSIHQRVMSYLEEDFRFLMEECRIPTELDPGGNNNNNNDTKGKQQQQVPSSEQEEVKDQEGEIDESFPGYSDETIASLSKIAGEMISGGYESECCQVYIISRRNAFEEVHKKLGLERISIDDMVLKVQWETLAGNMIPAWINTLKQCAAVYFPGERKLAEAVFASCPSVAAGLFGSLSRGVVIQLLNFAEGAAMTKRAAEKLFKLLDMYETLREIIPKVNGLFPEESVEELKTEMNIAKSRLGEAAISIFCDLENQIKQETARTAVPGGAVHPLTRYIMNYLSVAGDYKETLEQVFKDHSKIERADSTSRPHNENDGVPEKQASSPFAAQVLRVMDLLDSSLEGKARLYKDVAQNNFFMMNNGRYILQKIKGSSEMSQVMGDTWIRKKSSELRTYHKNYQRETWNRVLACLNPEGLNVNGKVQKPVLKERFKSFNSLFDEIHRTQSSWVVKDEQLQSELRVSISGVVVPAYRAFIGRFAQIFDPGRQTEKYIKYQPEDIETYIDELFDGKPHQSIARRRT 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00945 711 MobiDBLite consensus disorder prediction 492 514 - -
Gma19g00945 711 MobiDBLite consensus disorder prediction 220 243 - -
Gma19g00945 711 Gene3D Exocyst complex component Exo70 150 708 - -
Gma19g00945 711 MobiDBLite consensus disorder prediction 217 260 - -
Gma19g00945 711 Pfam Exo70 exocyst complex subunit 330 696 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gma19g00945 711 MobiDBLite consensus disorder prediction 32 46 - -
Gma19g00945 711 Coils Coil 83 103 - -
Gma19g00945 711 SUPERFAMILY Cullin repeat-like 150 699 IPR016159 -
Gma19g00945 711 PANTHER EXOCYST COMPLEX PROTEIN EXO70 67 707 IPR004140 GO:0000145|GO:0006887
Gma19g00945 711 MobiDBLite consensus disorder prediction 492 508 - -
Gma19g00945 711 MobiDBLite consensus disorder prediction 1 85 - -
Gma19g00945 711 MobiDBLite consensus disorder prediction 8 31 - -
Gma19g00945 711 MobiDBLite consensus disorder prediction 54 73 - -
Gma19g00945 711 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 67 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00945 Gma-Chr19 36517851 36519986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00945 1 711 EXO70 exocyst subunit family AT5G13990 45.257 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00945 K07195 - gmx:100820172 1295.03