Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00940 ATGATGAATTCATTGTGTGGAAGCTCACTGTCCCTCAAGAGTGAGAACAACAACTCTAGAACCAAACTCCAACAACCCACTTCTTCAAATGACTCAGTTTTGCAATCCAAGAAAAACAATGCCACTCAATCCTCTGGTGATCTAGACCAAACCAGCCTAACCCCACCAAGCCTAAACCTTCCATCACTCAAATTTGACTTAGATGGAGATGTGGAAGTTCAATCACCAGATAGTTCAATGTGGGAATCTTTTTTTGCTGACCATATAGATGGTGATTTCATGATCTCTTCCCCAGTGAGGACCCCACAAGCAGCCTCTTCCTACAATTGCAACTACAACTATGCTCAGGGAATGCAAGGCCAGAGTCTCTCAGGGTGTTCCCCACCTCGTTTTTCATCATCACAAATTGGAGCCTTCAACAGCAGCAGCAGCCTCAACAAAGGGAAAGGACTCAGCCCCCTCCACAGGGTGTTCAACTCACCCAACAATCAGTACATGCAGCATGTTGAGAACCTCTCACTGCCAGCAATAGAAGAGTTCTTGGAGGACTACCAAACCAAGGTGTCTTCTTCTGATCACAACATTACAAGTTCATCTGAGTGCTTTGACTTGTCATCTCATCAAATCCCTTCGTCCATTTTGGATGGCTTGGCACTGCACAATTCCTCGAGGTACCATCGTGGATCGGTCGTCGACGAAGAATCGACGGTGCACGGTGGTGGCGGTGGTGGTGGTGGCTCTTCTCAGTTGTCACAAGAGAGTGACATCTATCACCAGATGGGGTCCATGGCTAGTGCTTCTCTTTCACAGGCTCTACAACAAGAACGCTACCAAGAGAAACAGCAAAAGCAACAAGCACAACAACTGCAACAACAACAACGGCAGCACCAGCAAGAGAATCTGATGGTGCCTATTCCGATCGAAATCGAGCAGGAGCAAGACAGCGGGCTTCAACTGGTGCACCTGCTCCTGGCTTGCGCAGAAGCAGTAGCCAAAGAGGAATACATGCTCGCAAGAAGGTACCTCCACCACCTCAACCGCGTCGTCACCCCCTTAGGCGATTCCATGCAGCGCGTCGCCGCCTGCTTCACCGACTCCCTAAGCGCCAGGCTCAACTCCACCCTCACACCCAAACCCGCAACGCCGTCCAAACCCCTAACCCCCTCCAACTCCCTCGAGGTCCTCAAGATCTACCAGATCGTCTACCAGGCCTGCCCCTACGTCAAGTTCGCCCACTTCACTGCCAACCAGGCCATCTTCGAGGCTGTCGAGATCGAAGAACGCGTGCACGTCATCGATCTCGACATCCTCCAGGGCTACCAGTGGCCTGCTTTCATGCAAGCCCTCGCGGCGCGCCCAGCGGGCGCACCATTCTTAAGGATTACTGGAGTGGGTCCCTTGTTAGACGCCGTCCGTGAAACCGGACGGTGTCTCACAGAGCTGGCCCACTCCCTACGTATTCCTTTTGAGTTCCACGCGGTCGGGGAACAACTTGAAGATCTCAAGCCACACATGTTAAACCGCCGTGTCGGGGAGGCGCTGGCGGTTAACGCGGTTAACCACCTCCACCGCGTCCCAGGCAACCACTTGGGCAATTTGCTGACCATGCTACGTGACCAGGCACCTAGCATAGTAACTCTGGTGGAGCAAGAAGCTAGCCACAATGGACCTTACTTTCTAGGGCGTTTTCTTGAGGCCTTGCATTACTACTCCGCCATTTTCGACTCATTGGACGCCACTTTTCCGGCGGAATCCGCGCAGCGGGCGAAGGTGGAGCAGTACATATTCGCGCCGGAGATACGGAACATCGTGGCGTGCGAGGGGGCGGAGAGGTTCGAGAGGCACGAGAGGTTGGAGAAGTGGCGGAAGATAATGGAGGGGAAGGGGTTCAAGGGGGTGGCGCTGAGTCCGAACGCGGTGACTCAGTCGAAGATATTGTTGGGATTGTATTCGTGTGAGGGGTATAGGTTGACGGAGGATAAGGGTTGCTTGTTGCTTGGGTGGCAGGATAGGGCCATCATTGCTGCGTCTGCATGGCGGTGTTGA 2046 0.5313 MMNSLCGSSLSLKSENNNSRTKLQQPTSSNDSVLQSKKNNATQSSGDLDQTSLTPPSLNLPSLKFDLDGDVEVQSPDSSMWESFFADHIDGDFMISSPVRTPQAASSYNCNYNYAQGMQGQSLSGCSPPRFSSSQIGAFNSSSSLNKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEDYQTKVSSSDHNITSSSECFDLSSHQIPSSILDGLALHNSSRYHRGSVVDEESTVHGGGGGGGGSSQLSQESDIYHQMGSMASASLSQALQQERYQEKQQKQQAQQLQQQQRQHQQENLMVPIPIEIEQEQDSGLQLVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGDSMQRVAACFTDSLSARLNSTLTPKPATPSKPLTPSNSLEVLKIYQIVYQACPYVKFAHFTANQAIFEAVEIEERVHVIDLDILQGYQWPAFMQALAARPAGAPFLRITGVGPLLDAVRETGRCLTELAHSLRIPFEFHAVGEQLEDLKPHMLNRRVGEALAVNAVNHLHRVPGNHLGNLLTMLRDQAPSIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPAESAQRAKVEQYIFAPEIRNIVACEGAERFERHERLEKWRKIMEGKGFKGVALSPNAVTQSKILLGLYSCEGYRLTEDKGCLLLGWQDRAIIAASAWRC 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00940 681 ProSiteProfiles GRAS family profile. 310 680 IPR005202 -
Gma19g00940 681 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 16 679 IPR005202 -
Gma19g00940 681 Pfam GRAS domain family 319 680 IPR005202 -
Gma19g00940 681 MobiDBLite consensus disorder prediction 1 59 - -
Gma19g00940 681 Coils Coil 269 299 - -
Gma19g00940 681 MobiDBLite consensus disorder prediction 231 251 - -
Gma19g00940 681 PANTHER GRAS FAMILY PROTEIN RAM1 16 679 - -
Gma19g00940 681 MobiDBLite consensus disorder prediction 268 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00940 Gma-Chr19 36386005 36389405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00940 307 679 GRAS Transcription Factor Family AT3G54220 45.333 2.01e-98 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma19g00940 GRAS 8.2e-130 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00940 - - gmx:100805039 1266.52