Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00920 ATGACGACCGTTTTGAGGCCACCGATTGGGTTGCGCTTCCTCCAACCACCACAGCTTTCCCCTTCTCCCACATCGTGTGTTTCTTTCTCCCTCTCACTCAAGCTTCCCAGAATCAACTCTAATTACTCCTCTTTCGAAGTTAGAGACGTTACCTATCAACCCCCGGGGACTCAGCTTAGACTTCTGAATTCAGTTAGTTTTTCACTTCCAGAGAAGAGTTTTGGTTTAATTTTCGGGCAGAGTGGAAGCGGAAAAACAACTCTGTTGCAGCTTCTTGCAGGAATAAGCAAACCAACCTCTGGATCTATTTACATTCAAGAATATGAGAGTGATGGAAATCCCAGTCAACCTCCAGAGCCCTTGGTGCCGGAAAGGGTTGGTATTGTCTTCCAGTTTCCCGAGAGGTATTTTGTGGCTGATAATGTGCTTGATGAAGTCACTTTTGGGTGGCCAAGGCAAAAGGGTAATCATCACCTGAGGGAGAATCTTGCTCTAGGGCTACAGAGGGCAATTAACTGGGTAGTTGGATTAAGTGGGATATCATTGAATAAAAATCCTCACTCCCTCAGTGGTGGTTACAAGCGTCGTCTTGCCTTAGCAATACAATTAGTGCAAACCCCTGATCTATTGATATTGGATGAACCTCTTGCAGGACTTGATTGGAAAGCACGTGCAGATGTTGTGAAGCTTCTGAAGCATCTAAAAAAGGAATTAACTGTGTTAGTTGTCAGCCATGATTTGAGGTTAGAGTTCGCAAGTCTTGTTGATCGATCATGGAGAATGGAAATGGGTGGCAACCTTAGAGAGGAATTTCTACCATTATGA 825 0.4448 MTTVLRPPIGLRFLQPPQLSPSPTSCVSFSLSLKLPRINSNYSSFEVRDVTYQPPGTQLRLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGISKPTSGSIYIQEYESDGNPSQPPEPLVPERVGIVFQFPERYFVADNVLDEVTFGWPRQKGNHHLRENLALGLQRAINWVVGLSGISLNKNPHSLSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWKARADVVKLLKHLKKELTVLVVSHDLRLEFASLVDRSWRMEMGGNLREEFLPL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00920 274 CDD ABC_cobalt_CbiO_domain1 46 264 IPR015856 GO:0005524|GO:0016020|GO:0055085
Gma19g00920 274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 264 IPR027417 -
Gma19g00920 274 Gene3D - 36 271 IPR027417 -
Gma19g00920 274 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 45 272 IPR003439 GO:0005524
Gma19g00920 274 Pfam ABC transporter 62 216 IPR003439 GO:0005524
Gma19g00920 274 PANTHER ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTIC 37 270 - -
Gma19g00920 274 SMART AAA_5 71 265 IPR003593 -
Gma19g00920 274 PANTHER HEAVY METAL TRANSPORTER 37 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00920 Gma-Chr19 35798209 35827696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00920 46 247 Calmodulin-binding Proteins AT2G36910 25.943 6.44e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00920 - - gmx:100799365 514.227