Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00919 ATGTCACAGCCAGATTCTGACGGAGGCTCGACGACGAAAATGGTGGCACAACTTCAGATTGGAGGACAATTTAGGTGTCTTTGGAGGAAAAGCAGGAGATGGGTTAGAAGCCATAACAAAGAAGAGGAGGAGACACCTGCGGTTTGCGACGACGAGGAGACTAGAGCTCACGTCGTTGAGAATGCGAAAATTTTGAAACGCAGGGAGTGGAGTGGAGTGAACTTTTGCATCAACCGTTGGATTGGAGTTTCGTTTTGTTTGGGCGCCAAAAGCGTTTCTAGTCACACCCTTGAAACAGAAAAGAAAAACTTACTCATGAAAATGTCTGGGAAGGCGAAGAGAAGAGACGATGACGGTGCTTCTGACACCGACTCTAACTCCGAAGGCCATGTGTCGCCCAAGAAGTCCCTCAAGAAGGATTACGACGATGATCCTGACTCTATTACCATTTGCGAAGTTATTTCGAACAACAAGAGGGTTTCCGTGAGGAAGTGGAAAGGCAACATTATGGTTGACATTCACGAGTTTTACATCAAAGATGGCAAGCAATTGGCTGGTAGGAAAGGTTCCTTACATGATGTCCTTGCTAGACCTGTGACTTCATTTTCCAGATCTATTAGGAACACCCTTGATTTTGACTTCGAAGATGACAATGAAGGATTTTGGCTAGTTTACACTCTAGCAACTGTCTGTATCTGGAACTATTTGTCTCAGGGCTTTAGGAAGGTTGATTTGGACCGTTGGGAATTTGCGAATGAAGGATTCCAAGGAGGGAAGAAGCATCTGCTAAAGAACATAAGGAGGAGGAGAAAGTGCAACAAATTGCATCAGGGAGCATTCAATATGATGAAGCCAGACGTGGATTCTGAAGTGGAGAAGCTGAAGAAAGACCATAACATTTTGAAGGTGGAGATTCTAAAGCTGAGGCAGTAG 933 0.448 MSQPDSDGGSTTKMVAQLQIGGQFRCLWRKSRRWVRSHNKEEEETPAVCDDEETRAHVVENAKILKRREWSGVNFCINRWIGVSFCLGAKSVSSHTLETEKKNLLMKMSGKAKRRDDDGASDTDSNSEGHVSPKKSLKKDYDDDPDSITICEVISNNKRVSVRKWKGNIMVDIHEFYIKDGKQLAGRKGSLHDVLARPVTSFSRSIRNTLDFDFEDDNEGFWLVYTLATVCIWNYLSQGFRKVDLDRWEFANEGFQGGKKHLLKNIRRRRKCNKLHQGAFNMMKPDVDSEVEKLKKDHNILKVEILKLRQ 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00919 310 MobiDBLite consensus disorder prediction 108 141 - -
Gma19g00919 310 Coils Coil 291 310 - -
Gma19g00919 310 SMART hsfneu3 183 269 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma19g00919 310 Pfam Transcriptional Coactivator p15 (PC4) 154 189 IPR003173 GO:0003677|GO:0006355
Gma19g00919 310 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 239 310 IPR027725 -
Gma19g00919 310 SUPERFAMILY ssDNA-binding transcriptional regulator domain 154 189 IPR009044 GO:0003677|GO:0006355
Gma19g00919 310 Gene3D Transcriptional Coactivator Pc4; Chain A 138 195 IPR009044 GO:0003677|GO:0006355
Gma19g00919 310 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-9 239 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00919 Gma-Chr19 35759773 35770149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00919 237 310 HSF AT2G26150 51.852 3.19e-18 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Gma19g00919 PC4 3.6e-11 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00919 K09419 K25815 gmx:121174086 165.622