Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00893 ATGTACTGCATCAAGTCTAGTTGGACACTAGAAGGTTTCTTCAAAACCTTCAGTACAAATCTAAAGAGTGTTTTGTGCACTTGGATGcttgagtgtgagcttgagtgtgagcttgagtatgagTATGAGACAAGGAAAGAATCAACATCAAGAAAGTTTGAGCATTTCAGGCTGAGTGAGACAACAAGGATTGGTGGCACAATTGGTTACTTTCCCCCTGAGAGCTTCCAGAGAAGGAGCATTGCTACCTCAAAATCTGATGTGTTCAGCTTTGGGATTGTTGTGTTAGAGGTGGTTTGTGGTAGAAGGGCTATTGATCTCACATACTCTGATGAGAAAATCATGTTGCTTGATTGGATCAGAAGGCTTAGTGATGAAGGAAGGCTTGTTGTTGTTGTGGACACAAGGGTAACAGATGGTTCCTACAAGGTTTTTGAAATGGAGCATTTGATTCACATAAGCCTCTTGTGCACAATCCATGACCCTAAATTAAGGCCAAGCATGAAGTGGATTATGGAGGCACTTTCTAACATGTCAAACAAGTTGCACAGACTCCCTTCATTTCACTACCATCCTATGTACATCTCTTTGTCTTCCTCTTCTGACACTAGTCCAAATAGCACAAAAGGCACTGGCACAAGCTCAGGAATAGAAATTGCTACTAGCACTAGCAATCATACTAGTTCCAATTCCAAATTTGTCACAGCCACATGA 714 0.3922 MYCIKSSWTLEGFFKTFSTNLKSVLCTWMLECELECELEYEYETRKESTSRKFEHFRLSETTRIGGTIGYFPPESFQRRSIATSKSDVFSFGIVVLEVVCGRRAIDLTYSDEKIMLLDWIRRLSDEGRLVVVVDTRVTDGSYKVFEMEHLIHISLLCTIHDPKLRPSMKWIMEALSNMSNKLHRLPSFHYHPMYISLSSSSDTSPNSTKGTGTSSGIEIATSTSNHTSSNSKFVTAT 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00893 237 Pfam Protein tyrosine and serine/threonine kinase 66 120 IPR001245 GO:0004672|GO:0006468
Gma19g00893 237 Gene3D Transferase(Phosphotransferase) domain 1 42 189 - -
Gma19g00893 237 MobiDBLite consensus disorder prediction 199 237 - -
Gma19g00893 237 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 19 237 - -
Gma19g00893 237 SUPERFAMILY Protein kinase-like (PK-like) 59 205 IPR011009 -
Gma19g00893 237 ProSiteProfiles Protein kinase domain profile. 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00893 237 PANTHER - 19 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00893 Gma-Chr19 34938093 34939272 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00893 50 175 Receptor kinase-like Gene Family AT1G15530 42.063 1.76e-23 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gma19g00893 PK_Tyr_Ser-Thr 3.2e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00893 - - gmx:100818547 343.584