Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00875 ATGGCCACAACAGCACGTTCCCTCATCATCGCCCGTGGCCACCACATTGAGTCTGTCCCGGAGCTCCCACTCGTTGTTAACGACTCCACCAAGAGCATCGAGAAAACAAAAGCTAATGGTGGTGACACCACTGACTCTTTGTTTTCACCATCAATGGCACTGCCATGCAACTCCGTGAACCACACTGTTAACTGCAACAAACCCCGACGGAATAGGCGACAGTGCGTTTGGCTGCCCCCAGCAATCGAACTCCTTGTGCTCCTCGCACCTCATTCTCTCTCTCTCTCGTATCTGCAACTTCAACTAACTAACTTTTATGAAGCCGAAGGCGTCAAGCTCATCAACATCAAGTTGATCGAGACTGGAGAGAAGGAGCGCCTCATGGAGCTGTTGAGGGAAAGGCTTGTTGATTGCGGTTGGAAGGATGAAATGGAAACTCTCTGCAGAGCTGTTGTGAAGAAGAAAGGGAGGAATAATGTTACTGTTGATGAACTTGTACATGTAATCACTCCAAAGGGACGAGTCTCCATTCCTGATTCCGTAAAGGCTGAGTTGTTGCAGAGGATTCGAACATTTCTCGTGTCTGCTGCTCTTTAA 597 0.4874 MATTARSLIIARGHHIESVPELPLVVNDSTKSIEKTKANGGDTTDSLFSPSMALPCNSVNHTVNCNKPRRNRRQCVWLPPAIELLVLLAPHSLSLSYLQLQLTNFYEAEGVKLINIKLIETGEKERLMELLRERLVDCGWKDEMETLCRAVVKKKGRNNVTVDELVHVITPKGRVSIPDSVKAELLQRIRTFLVSAAL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00875 198 Pfam Transcription factor e(y)2 114 193 IPR018783 GO:0000124|GO:0003713|GO:0005643|GO:0006406|GO:0045893
Gma19g00875 198 PANTHER ENHANCER OF YELLOW 2 TRANSCRIPTION FACTOR 112 198 IPR018783 GO:0000124|GO:0003713|GO:0005643|GO:0006406|GO:0045893
Gma19g00875 198 Hamap Transcription and mRNA export factor <gene_name> [SUS1]. 109 196 IPR018783 GO:0000124|GO:0003713|GO:0005643|GO:0006406|GO:0045893
Gma19g00875 198 Gene3D - 107 197 IPR038212 -
Gma19g00875 198 Gene3D - 1 39 IPR023574 GO:0003735|GO:0005840|GO:0006412
Gma19g00875 198 PANTHER TRANSCRIPTION AND MRNA EXPORT FACTOR ENY2 112 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00875 Gma-Chr19 34675450 34679502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00875 2 38 Cytoplasmic Ribosomal Protein Gene Family AT5G02870 59.459 2.74e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00875 K11368 - gmx:100527713 162.925