LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma19g00854	ATGCCGGAAGAAACGACGTCGATCGACTACGTGATGGAGGCGGCATCTGGGCCCCACTTCTCCGGCCTGAGACTTGACGGCCGTATGCCGTCCTCCGCCACCGCCGCCGCCGCGTCCTCCTCTGCCGATTCTACCCTAACCCCCGATTTCCTCCCCAATCAACCCTTCGTCATAGGTGTTTCGGGAGGTACTGCCTCGGGAAAAACCACCGTCTGCGACATGATAATTCAGCAACTTCACGATCACCGCGTTGTTCTCGTCAATCAGGACTCGTTTTATCGCGGGTTGAATCCTGAAGAGTTGGAACGCGTTCACGAGTACAATTTCGACCACCCTGATGCTTTTGACACGGAGCAGTTGTTAGAGTGCACGATGAAGCTTATCAGTGGCCAGGGCGTGCATGTTCCCATTTACGACTTCAAGAAGCACCAACGCTCTTCCGATAGTTTTCGCCAGGTGAATGCTTCTGATGTGATTATATTGGAGGGGATTCTTGTGTTCCACGATCAGCGCGTGCGGGATCTGATGAACATGAAGATCTTTGTTGACACAGATGCTGATGTGAGACTTGCTCGTAGAATTAGGCGTGACACAATGGAGAGAGGCAGGGATATAAACTCTGTTCTTGAACAGTATGCAAAATTTGTTAAGCCTGCATTTGATGATTTTGTTCTACCATCAAAAAAGTACGCTGACGTGATCATTCCTCGTGGAGGTGATAATCATGTTGCCATTGATTTGATTGTGCAACATATCCGTACAAAGCTCGGCCAACATGATCTATGCAAAATATATCCAAATGCCTATGTTATTCAGTCTACATTCCAGATCAGGGGAATGCATACGTTGATTCGTGACCGAGACATATCAAAGCATGATTTCGTATTTTATTCAGATCGACTTATACGCCTGGTTGTTGAGCATGGTCTAGGTCATCTGCCTTTCACCGAAAAGCAAGTGGTTACTCCCACAGGATCTGTTTATACCGGTGTTGATTTCTGCAAAAAATTGTGTGGTGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAAAATGCACTTCGTGCATGTTGCAAAGGTATTAAAATTGGTAAAATTTTGATTCACCGGGATGGAGACAATGGAAAACAGCAGCTTATATATGAAAAGCTCCCCAAGGATATTTCAGAACGGCATGTCTTGCTTCTTGACCCTGTCCTGGCCACAGGTAACTCTGCCAACCAAGCAATTGAATTACTCATTCAGAAAGGAGTACCAGAAAGTCACATTATATTCTTGAATCTCATTTCTGCTCCTGAGGGAATCCACTGCGTGTGTAAAAGGTTTCCATCATTGAAGATTGTCACGTCTGAGATTGACATTGAAATAAACGAAGAGTATCGTGTTATCCCAGGATTGGGGGAATTTGGTGATCGATACTTTGGTACCGATGATTGA	1434	0.4568	MPEETTSIDYVMEAASGPHFSGLRLDGRMPSSATAAAASSSADSTLTPDFLPNQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLNPEELERVHEYNFDHPDAFDTEQLLECTMKLISGQGVHVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQRVRDLMNMKIFVDTDADVRLARRIRRDTMERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNAYVIQSTFQIRGMHTLIRDRDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDIEINEEYRVIPGLGEFGDRYFGTDD	477

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma19g00854	477	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	49	248	IPR027417	-
	Gma19g00854	477	PANTHER	URIDINE KINASE	39	474	-	-
	Gma19g00854	477	CDD	UMPK	57	255	IPR000764	-
	Gma19g00854	477	SUPERFAMILY	PRTase-like	258	476	IPR029057	-
	Gma19g00854	477	CDD	PRTases_typeI	332	448	IPR000836	-
	Gma19g00854	477	PRINTS	Uridine kinase signature	130	145	-	-
	Gma19g00854	477	PRINTS	Uridine kinase signature	187	197	-	-
	Gma19g00854	477	PRINTS	Uridine kinase signature	55	72	-	-
	Gma19g00854	477	PRINTS	Uridine kinase signature	85	96	-	-
	Gma19g00854	477	PRINTS	Uridine kinase signature	223	236	-	-
	Gma19g00854	477	PRINTS	Uridine kinase signature	201	212	-	-
	Gma19g00854	477	TIGRFAM	udk: uridine kinase	56	255	IPR000764	-
	Gma19g00854	477	Pfam	Phosphoribulokinase / Uridine kinase family	57	243	IPR006083	GO:0005524\|GO:0016301
	Gma19g00854	477	Gene3D	-	259	475	IPR029057	-
	Gma19g00854	477	PANTHER	URIDINE KINASE-LIKE PROTEIN 2, CHLOROPLASTIC	39	474	IPR029930	GO:0004849\|GO:0044206
	Gma19g00854	477	Pfam	Uracil phosphoribosyltransferase	273	475	-	-
	Gma19g00854	477	Gene3D	-	52	258	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma19g00854	Gma-Chr19	34041932	34049955	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma19g00854	1	477	PRT Gene Family	AT5G40870	85.155	0.0	833

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma19g00854	K00876		-	gmx:100786137	935.25