Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00843 ATGGGCACAGTAGAAATGATCATTGCATTTCACATGAAGGCTTTGGTCTTTTTCCTTTGGCTGTTTGTCCCCTCATTGGGCAAAGACTTGCTAAGCTGTGAGACAACTTCACCTGATGCCTCTGGCTACCATTGCATTGAAAATGTGTCACAGAACCAATGTGAGACATTTGCACTCTTTTTAACAAACTCTTACTACTCCTCTCTCTCCAACCTCACCTCTTATTTGGGACTAAACAAGTTTGTCATAGCACAAGCAAATGGTTTCTCTGCAGACACTGAGTTCCTCTCCCAGGATCAGCCTCTACTGGTACCTATTCATTGTAAATGCATAGGTGGCTTCTCTCAGGCTGAGTTAACCAAAACTACCGTCAAAGGAGAGAGCTTCTATGGCATTGCTCAATCACTAGAGGGATTGACAACTTGCAAGGCTATTAGGGACAACAACCCTGGTGTGTCACCTTGGAATCTTGATGACAAAGTGAGATTGGTTGTTCCATTGAGATGTTCCTGCCCATTTTCATCTCAAGTTAGACCACAACCAAAGCTTCTGCTTTCTTATCCAGTAAGTGAAGGCCTTAGGACTAGAAGTAGTCTTGCACCCTTTACCTCTATTCTCATTCCACTTAATGGTAAGCCTATCATTGGTCCTTTGGTTAAGCCCAAGGAACCCGATTCTGGCAATCAAACAACCAGCATCCCAGTGACAAGTCCACACAAGAAATCACCAATGTGGAAGACTGAATTGTGCATTGGCCTAGCTGGGGTTGCACTTGGAGTCTGCATTGCTTTTGCTGCCGCCTTTTTCTTCATCAGATTGAAACACAAGAAGGAGGAAGAGAATTCATGCAAAGAAGGGGACTTGGAGCTGCAATATCTGAACCAAAGTGTGAGAACCACCTCAACTAGTGACAAGAAAGTTTCATTTGAAGGGTCTCAGGATGCTCTTGATGTGAAAATCGTGGACGCCCTGCCGCGGAAGTTGTTGCTGGATACATACACCATTGAAGATGTGAGAAAAGCAACTGAAGATTTCAGCTCAAGCAATCACATTGAAGGGTCAGTGTATCACGGTCGTCTGAACGGGAAGAACATGGCAATCAAAGGGACAAAGGCAGAAGTAGTGTCAAAGATAGATCTTGGCCTTTTCCATGATGCACTTCACCATCATCCCAACATACTCAGGCTTCTTGGAACTAGCATGTTAGAGGGGGAGCAGCAAGAAGAGTCATTTTTAGTTTTTGAGTATGCCAAAAATGGTTCATTGAAAGATTGGCTCCATGGTGGATTAGCCATCAAGAACCAATTCATTGCTTCCTGCTACTGTTTCCTGACTTGGAGCCAAAGGCTCAGGATCTGCCTTGATGTGGCCGGTGCCTTGCAGTATATGCACCATGTTATGAATCCAAGCTATGTGCATAGAAATGTAAAGAGCAGGAACATCTTTTTGGATGAAGAATTTGGTGCCAAGATAGGGAATTTTGGTATGGCAGGTTGTGTTGAGAATGACACTGAGGACCCTCAATTCTATTCCACCAACCCTGCCTCTTGGAGTCTTGGTTATTTGGCACCTGAATATGTGCACCAAGGTGTAATTTCCCCAAGTGTTGATATCTTTGCTTATGGGGTGGTTTTGTTGGAAGTTTTGTCCGGTCAAACACCTATAAGCAGGCCCAATGAGAAGGGAGAAGGAAGCATTTGGCTTACAGATAAAATCAGGTCCATTTTGGTGTCAGAAAATGTGAATGAACTAAGGGATTGGATAGACAGTGCATTGGGGGAGAACTATTCATTTGATGCAGCTGTGACACTTGCCAACATTGCAAGAGCTTGTGTGGAGGAAGATTCCTCTTTGAGACCAAGTGCAAGGGAAATTGTTGAGAAGCTATCAAGATTGGTGGAGGAATTACCACAAGGGGAAAATGACATGTTAATGTGTGAAAGCTCTAGCAAACCTCTGGTGAAGGCAGTGGAAAACAATGTTGAATAA 1989 0.4384 MGTVEMIIAFHMKALVFFLWLFVPSLGKDLLSCETTSPDASGYHCIENVSQNQCETFALFLTNSYYSSLSNLTSYLGLNKFVIAQANGFSADTEFLSQDQPLLVPIHCKCIGGFSQAELTKTTVKGESFYGIAQSLEGLTTCKAIRDNNPGVSPWNLDDKVRLVVPLRCSCPFSSQVRPQPKLLLSYPVSEGLRTRSSLAPFTSILIPLNGKPIIGPLVKPKEPDSGNQTTSIPVTSPHKKSPMWKTELCIGLAGVALGVCIAFAAAFFFIRLKHKKEEENSCKEGDLELQYLNQSVRTTSTSDKKVSFEGSQDALDVKIVDALPRKLLLDTYTIEDVRKATEDFSSSNHIEGSVYHGRLNGKNMAIKGTKAEVVSKIDLGLFHDALHHHPNILRLLGTSMLEGEQQEESFLVFEYAKNGSLKDWLHGGLAIKNQFIASCYCFLTWSQRLRICLDVAGALQYMHHVMNPSYVHRNVKSRNIFLDEEFGAKIGNFGMAGCVENDTEDPQFYSTNPASWSLGYLAPEYVHQGVISPSVDIFAYGVVLLEVLSGQTPISRPNEKGEGSIWLTDKIRSILVSENVNELRDWIDSALGENYSFDAAVTLANIARACVEEDSSLRPSAREIVEKLSRLVEELPQGENDMLMCESSSKPLVKAVENNVE 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00843 662 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 7 192 - -
Gma19g00843 662 PANTHER PROTEIN LYK2 196 658 - -
Gma19g00843 662 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 196 658 - -
Gma19g00843 662 SUPERFAMILY Protein kinase-like (PK-like) 329 629 IPR011009 -
Gma19g00843 662 PANTHER PROTEIN LYK2 7 192 - -
Gma19g00843 662 Gene3D Phosphorylase Kinase; domain 1 323 416 - -
Gma19g00843 662 ProSiteProfiles Protein kinase domain profile. 318 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00843 662 MobiDBLite consensus disorder prediction 218 239 - -
Gma19g00843 662 Pfam Protein kinase domain 353 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00843 662 Gene3D Transferase(Phosphotransferase) domain 1 417 649 - -
Gma19g00843 662 MobiDBLite consensus disorder prediction 224 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00843 Gma-Chr19 33739976 33742045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00843 42 655 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 40.860 8.27e-139 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gma19g00843 Pkinase 1.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00843 - - gmx:100816082 1295.03