Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00825 ATGACGGTGTTCTCCGCCAAGCAGGTGTTCCCGGTGGACTACGAGGAGACCGAAGTGTCACAGCGCCTCCTCGAAGCCTCCCACTCCGGCGATCTCTCCCTGGCATTCCGCTGCATTGTCGATCCCTCCGTCGACGTCAACTTCGCCGGCGCCGTCACGCTCAAGATCGCCTCCACCGACCTCCTCCTCCTCCCGGAGTCCCCCAGCCAAGTCCGCCTCGACTTCCAGGAATTCATCTCCGACGTCTCGCCGCTCTTCCTCGCCGTCCACGCCGCCCACGCCGCCCTCGTCAGAAAGTTACTGAGTGTGGGAGCTGATGTAAACCAGAGGCTCTTCAGAGGCTTTGCAACAACTGCAGCAGTGAGGGAGGGTCACTTTAATATTCTTGAAATCTTACTTAAAGCAGGGGCATCACAACCAGCATGTGAAGAAGCTCTTATAGAGGCAAGTTGCCATGGTCAAGCAGGGTGTTTAGAATTGCTCATGAGCTCTGATTTCATCCGACCTCATGTTGCTGTACATGCTCTTGTCACTGCAAGCTGCAGGGGGTTTGTTGATGTGGTTGAGACGCTCATAAAGTGTGGTGTGGATTCAAGTGCAACAGACCGGGTGCTTTTACAGTCACTTAAGCCTTCTCTCCACATAAATGTGGATTGTACTGCACTTGTTGCTGCTGTAATTCATAGGCAGGTTCCCGTTGTTGATTTGCTATTGCAGAATGGTGTGAGGTTAGACTTTGAGGTGAGGCTTGGAGCATGGTCATGGGACACTTCTACTGGTGAAGAGCTTCGTGTTGGTGCTGGGCTGGGAGAACCTTATGGCATAACCTGGTGTGCAGTCGAGTATTTTGAAAAAAGTGGTGCTATTCTACGCTTGCTCCTGCAACATGCCTCCTCCAAACCTCACAGTGGAAGGACCCTTCTACATCATGCCATACTCTGTGGCAATGTTGAGGCTGTCAAGGTGCTCTTAGAATGTGGTGCGGATGTGGAATCCCCAGTTAAAACTACCAGCAAGACTCGTTTCCTTCCTATACACATGGCATCTCGGATAGGCTTACCAACAATTATTCAATGCCTTATTGATTTTGGTTGTGATTTGAACTCCACAACAGACTCTGGTGACTCAGCTTTGATGATCTGTGCAAAATATAAACAAGAAGAGTGTCTCAAAGTACTGACAAGGGCTGGTGCTGATTTTGGCTTGGTGAATATTGCTGGTCAATCTGCAAGTTCAATCGCTAAGTCGGACAATTGGTCACTTGGTTTTCAACAAGCAGTGTTGGATACAATCAGAAGAGGCAAGATACCCAAATCCAGCAATGCTACTACTTTTTCGCCTTTAATATTTGTAGCTCAAGCTGGAGATACTGAGGCATTGAAAATTGTCATTGAATCGGGAGCATTTGATGTTGACTATCAAGATGACAGTGGTTTCTCTGCAGTTATGCATGCTGCTTCAAAGGGCCATGTGGATTCTTTTCGATTGCTGGTATATGCTGGAGCTGATGTAAAGTTGTGCAATAAATCTGGTGAAACAGCAATAACCCTATCTGAAATGAATCTGAACTGTGATTTATTCGAAAAGGTCATGCTTGAGTTTGAGCTTGAAAAGGGCAATATCAATGCTGGTGGATTCTATGCTTTACATCGTGCAGCTCGTCGTGGTGACTTGGATGCTGTTACATTGCTCACCAGCAAAGGTTATGATGTCAATGCCCCTGATGGAGAGGACTACACTCCCCTCATGTTAGCAGCAAGGGAAGGCCATGCATCCATTTGCGAGCTTCTAATTTCATATGGTGCCCATTGTAATGCCAAAAACGCTCGAGGGGAAACTGCACTTTTACTCGCAAGGAAAGTCACAGGAGGGAAAAGCGATGCAGAGGCTGTTATACTAAATGAACTTGCTCGTAAATTGGTATTAGGTGGTGCCTATGTTCTGAAGCACACCAAAGGTGGTAAGGGCTCTCCCCATGGGAAACAAATGCAAATGTTGGGATCTGCCGGTGTGCTGTGTTGGGGGAAGTCAAGCCGGAGAAATGTGGTTTGCTGTGAGGCAGAGTTAGGGCCAAGCTCAACATTACGCAGAAATAGGTACAAGAAAGGTGATGCAGAAGAACCTGGAATGTTTAGGGTGCTTACTAGCAAGAGCAGGGAAGTGCATTTTGTATGTGATGGGGGGTTAGAAGTTGCTGAGCTTTGGGTTAGGGGTATTAAACTTGTAACCAAAGAGGCTATTTTTCATAAGCAGAGATCGGTCTAA 2265 0.4759 MTVFSAKQVFPVDYEETEVSQRLLEASHSGDLSLAFRCIVDPSVDVNFAGAVTLKIASTDLLLLPESPSQVRLDFQEFISDVSPLFLAVHAAHAALVRKLLSVGADVNQRLFRGFATTAAVREGHFNILEILLKAGASQPACEEALIEASCHGQAGCLELLMSSDFIRPHVAVHALVTASCRGFVDVVETLIKCGVDSSATDRVLLQSLKPSLHINVDCTALVAAVIHRQVPVVDLLLQNGVRLDFEVRLGAWSWDTSTGEELRVGAGLGEPYGITWCAVEYFEKSGAILRLLLQHASSKPHSGRTLLHHAILCGNVEAVKVLLECGADVESPVKTTSKTRFLPIHMASRIGLPTIIQCLIDFGCDLNSTTDSGDSALMICAKYKQEECLKVLTRAGADFGLVNIAGQSASSIAKSDNWSLGFQQAVLDTIRRGKIPKSSNATTFSPLIFVAQAGDTEALKIVIESGAFDVDYQDDSGFSAVMHAASKGHVDSFRLLVYAGADVKLCNKSGETAITLSEMNLNCDLFEKVMLEFELEKGNINAGGFYALHRAARRGDLDAVTLLTSKGYDVNAPDGEDYTPLMLAAREGHASICELLISYGAHCNAKNARGETALLLARKVTGGKSDAEAVILNELARKLVLGGAYVLKHTKGGKGSPHGKQMQMLGSAGVLCWGKSSRRNVVCCEAELGPSSTLRRNRYKKGDAEEPGMFRVLTSKSREVHFVCDGGLEVAELWVRGIKLVTKEAIFHKQRSV 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00825 754 Pfam Ankyrin repeats (3 copies) 445 505 IPR002110 GO:0005515
Gma19g00825 754 Pfam Ankyrin repeats (3 copies) 282 331 IPR002110 GO:0005515
Gma19g00825 754 Gene3D - 528 628 IPR036770 -
Gma19g00825 754 Gene3D - 418 527 IPR036770 -
Gma19g00825 754 ProSiteProfiles Ankyrin repeat profile. 303 335 IPR002110 GO:0005515
Gma19g00825 754 ProSiteProfiles Ankyrin repeat region circular profile. 477 504 - -
Gma19g00825 754 Gene3D - 275 417 IPR036770 -
Gma19g00825 754 SMART ANK_2a 303 332 IPR002110 GO:0005515
Gma19g00825 754 SMART ANK_2a 577 606 IPR002110 GO:0005515
Gma19g00825 754 SMART ANK_2a 217 246 IPR002110 GO:0005515
Gma19g00825 754 SMART ANK_2a 171 200 IPR002110 GO:0005515
Gma19g00825 754 SMART ANK_2a 111 141 IPR002110 GO:0005515
Gma19g00825 754 SMART ANK_2a 340 369 IPR002110 GO:0005515
Gma19g00825 754 SMART ANK_2a 373 402 IPR002110 GO:0005515
Gma19g00825 754 SMART ANK_2a 544 573 IPR002110 GO:0005515
Gma19g00825 754 SMART ANK_2a 443 473 IPR002110 GO:0005515
Gma19g00825 754 SMART ANK_2a 477 506 IPR002110 GO:0005515
Gma19g00825 754 SMART ANK_2a 80 109 IPR002110 GO:0005515
Gma19g00825 754 ProSiteProfiles Ankyrin repeat profile. 577 609 IPR002110 GO:0005515
Gma19g00825 754 ProSiteProfiles Ankyrin repeat profile. 80 112 IPR002110 GO:0005515
Gma19g00825 754 ProSiteProfiles Ankyrin repeat region circular profile. 80 108 - -
Gma19g00825 754 PANTHER ANKYRIN DOMAIN PROTEIN 5 749 - -
Gma19g00825 754 SUPERFAMILY Ankyrin repeat 292 618 IPR036770 -
Gma19g00825 754 Gene3D - 11 169 IPR036770 -
Gma19g00825 754 ProSiteProfiles Ankyrin repeat profile. 477 509 IPR002110 GO:0005515
Gma19g00825 754 ProSiteProfiles Ankyrin repeat profile. 340 372 IPR002110 GO:0005515
Gma19g00825 754 PANTHER ANKYRIN REPEAT-CONTAINING 5 749 - -
Gma19g00825 754 ProSiteProfiles Ankyrin repeat region circular profile. 303 331 - -
Gma19g00825 754 ProSiteProfiles Ankyrin repeat region circular profile. 544 575 - -
Gma19g00825 754 Gene3D - 170 251 IPR036770 -
Gma19g00825 754 ProSiteProfiles Ankyrin repeat profile. 544 576 IPR002110 GO:0005515
Gma19g00825 754 SUPERFAMILY Ankyrin repeat 81 331 IPR036770 -
Gma19g00825 754 Pfam Ankyrin repeats (many copies) 570 618 IPR002110 GO:0005515
Gma19g00825 754 ProSiteProfiles Ankyrin repeat region circular profile. 577 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00825 Gma-Chr19 33159055 33164066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00825 431 599 Ion Channels AT4G32500 27.219 5.66e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00825 - - gmx:100809132 1481.85