Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00817 ATGTATTCTGTTTTATACTATTTCCATGAAATTTTATTGTTCTGTATTTCTTTTCTCTCTTCAATTTTACTTGGGGCCACTGCTAAAGTGAATGAAACTGCTAAGAATTTTGGTGATGAAAAGCAAAACCCTTCAGGTGAGGATGATGTTGCTGCAGATGGAAACAAGGAAAATCCTACTAATGAAGCTGAACAAAAAGAGCCTGAGAATAAGGATGCAGAAATTGAAACAAGAATCAAGTTAGAAACAAAGGTTGAAAAGCATATTCAGAAACTTTTATTACTAGGGAAAAGCTGTAGGTTGAGATGGTTCAATCAATTGGACCCAAGAATAAACAGAAATCCTTTCACAGAGGAAGAAGAAGAGCGTCTTCTAGCTTCACACCGGATTCATGGTAATAGATGGGCTGTAATTGCAAGACACTTCCCAGGTCGAACTGATAACGCACAAAACCCTTCAGGTGAGGATGATGTTGCTGCAGATGGAAACAAGGAAAATCCTACTAATGAAGCTGAACAAAAAGAGCCTGAGAATAAGCAAAACCCTTCAGGTGAGGATGATGTTGCTGCAGATGGAAACAAGGAAAATCCTACTAATGAAGCTGAACAAAAAGAGCCTGAGAATAAGGATGCAGAAATTGAAACAAGAATCAAGTTAGAAACAAAGGTTGAAAAGCATATTCAGAAACTTTTATTACTAGGGAAAAGCTGTAGGTTGAGATGGTTCAATCAATTGGACCCAAGAATAAACAGAAATCCTTTCACAGAGGAAGAAGAAGAGCGTCTTCTAGCTTCACACCGGATTCATGGTAATAGATGGGCTGTAATTGCAAGACACTTCCCAGGTCGAACTGATAACGCAGTAAAGAATCATTGGCATGTGATAATGGCAAGGATTCGGAGAGAAAGGTCTAAAATTAATAATCCAAAACTGCAGCCACTTTTTGCTCCAAACTTGAAGGATGACCTTGAGGCCATCCCTTCTTTTGTTGAGAAGTATTATGAAAAGTACAGCCACCCTTGTGTCACACTCACACATAGCTCTTTTCAATTTCCCGGCAAGAAGTTTTACTTTCAAGATCCAAGTTCTGCTGGTTCCACTGTGCCTCCAGtttcaattgcagagaggaaggagttgtag 1140 0.3807 MYSVLYYFHEILLFCISFLSSILLGATAKVNETAKNFGDEKQNPSGEDDVAADGNKENPTNEAEQKEPENKDAEIETRIKLETKVEKHIQKLLLLGKSCRLRWFNQLDPRINRNPFTEEEEERLLASHRIHGNRWAVIARHFPGRTDNAQNPSGEDDVAADGNKENPTNEAEQKEPENKQNPSGEDDVAADGNKENPTNEAEQKEPENKDAEIETRIKLETKVEKHIQKLLLLGKSCRLRWFNQLDPRINRNPFTEEEEERLLASHRIHGNRWAVIARHFPGRTDNAVKNHWHVIMARIRRERSKINNPKLQPLFAPNLKDDLEAIPSFVEKYYEKYSHPCVTLTHSSFQFPGKKFYFQDPSSAGSTVPPVSIAERKEL 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00817 379 MobiDBLite consensus disorder prediction 158 212 - -
Gma19g00817 379 ProSiteProfiles Myb-like domain profile. 246 296 IPR001005 -
Gma19g00817 379 CDD SANT 253 293 IPR001005 -
Gma19g00817 379 Gene3D - 252 313 - -
Gma19g00817 379 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 149 IPR017930 -
Gma19g00817 379 SUPERFAMILY Homeodomain-like 234 299 IPR009057 -
Gma19g00817 379 MobiDBLite consensus disorder prediction 144 212 - -
Gma19g00817 379 Gene3D - 113 250 - -
Gma19g00817 379 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 246 300 IPR017930 -
Gma19g00817 379 PANTHER OS08G0435700 PROTEIN 96 149 - -
Gma19g00817 379 PANTHER OS08G0435700 PROTEIN 234 319 - -
Gma19g00817 379 MobiDBLite consensus disorder prediction 41 73 - -
Gma19g00817 379 SMART sant 250 298 IPR001005 -
Gma19g00817 379 SMART sant 112 154 IPR001005 -
Gma19g00817 379 MobiDBLite consensus disorder prediction 36 73 - -
Gma19g00817 379 SUPERFAMILY Homeodomain-like 96 148 IPR009057 -
Gma19g00817 379 Pfam Myb-like DNA-binding domain 251 294 IPR001005 -
Gma19g00817 379 Pfam Myb-like DNA-binding domain 113 148 IPR001005 -
Gma19g00817 379 PANTHER MYB PROTEIN-RELATED 96 149 - -
Gma19g00817 379 ProSiteProfiles Myb-like domain profile. 108 148 IPR001005 -
Gma19g00817 379 CDD SANT 115 149 IPR001005 -
Gma19g00817 379 PANTHER MYB PROTEIN-RELATED 234 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00817 Gma-Chr19 32883571 32899558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00817 234 306 MYB Transcription Factor Family AT1G17950 93.151 4.99e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma19g00817 Myb_DNA-binding 1.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00817 K09422 - gmx:100785170 293.123