Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma19g00817 | ATGTATTCTGTTTTATACTATTTCCATGAAATTTTATTGTTCTGTATTTCTTTTCTCTCTTCAATTTTACTTGGGGCCACTGCTAAAGTGAATGAAACTGCTAAGAATTTTGGTGATGAAAAGCAAAACCCTTCAGGTGAGGATGATGTTGCTGCAGATGGAAACAAGGAAAATCCTACTAATGAAGCTGAACAAAAAGAGCCTGAGAATAAGGATGCAGAAATTGAAACAAGAATCAAGTTAGAAACAAAGGTTGAAAAGCATATTCAGAAACTTTTATTACTAGGGAAAAGCTGTAGGTTGAGATGGTTCAATCAATTGGACCCAAGAATAAACAGAAATCCTTTCACAGAGGAAGAAGAAGAGCGTCTTCTAGCTTCACACCGGATTCATGGTAATAGATGGGCTGTAATTGCAAGACACTTCCCAGGTCGAACTGATAACGCACAAAACCCTTCAGGTGAGGATGATGTTGCTGCAGATGGAAACAAGGAAAATCCTACTAATGAAGCTGAACAAAAAGAGCCTGAGAATAAGCAAAACCCTTCAGGTGAGGATGATGTTGCTGCAGATGGAAACAAGGAAAATCCTACTAATGAAGCTGAACAAAAAGAGCCTGAGAATAAGGATGCAGAAATTGAAACAAGAATCAAGTTAGAAACAAAGGTTGAAAAGCATATTCAGAAACTTTTATTACTAGGGAAAAGCTGTAGGTTGAGATGGTTCAATCAATTGGACCCAAGAATAAACAGAAATCCTTTCACAGAGGAAGAAGAAGAGCGTCTTCTAGCTTCACACCGGATTCATGGTAATAGATGGGCTGTAATTGCAAGACACTTCCCAGGTCGAACTGATAACGCAGTAAAGAATCATTGGCATGTGATAATGGCAAGGATTCGGAGAGAAAGGTCTAAAATTAATAATCCAAAACTGCAGCCACTTTTTGCTCCAAACTTGAAGGATGACCTTGAGGCCATCCCTTCTTTTGTTGAGAAGTATTATGAAAAGTACAGCCACCCTTGTGTCACACTCACACATAGCTCTTTTCAATTTCCCGGCAAGAAGTTTTACTTTCAAGATCCAAGTTCTGCTGGTTCCACTGTGCCTCCAGtttcaattgcagagaggaaggagttgtag | 1140 | 0.3807 | MYSVLYYFHEILLFCISFLSSILLGATAKVNETAKNFGDEKQNPSGEDDVAADGNKENPTNEAEQKEPENKDAEIETRIKLETKVEKHIQKLLLLGKSCRLRWFNQLDPRINRNPFTEEEEERLLASHRIHGNRWAVIARHFPGRTDNAQNPSGEDDVAADGNKENPTNEAEQKEPENKQNPSGEDDVAADGNKENPTNEAEQKEPENKDAEIETRIKLETKVEKHIQKLLLLGKSCRLRWFNQLDPRINRNPFTEEEEERLLASHRIHGNRWAVIARHFPGRTDNAVKNHWHVIMARIRRERSKINNPKLQPLFAPNLKDDLEAIPSFVEKYYEKYSHPCVTLTHSSFQFPGKKFYFQDPSSAGSTVPPVSIAERKEL | 379 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma19g00817 | 379 | MobiDBLite | consensus disorder prediction | 158 | 212 | - | - | |
Gma19g00817 | 379 | ProSiteProfiles | Myb-like domain profile. | 246 | 296 | IPR001005 | - | |
Gma19g00817 | 379 | CDD | SANT | 253 | 293 | IPR001005 | - | |
Gma19g00817 | 379 | Gene3D | - | 252 | 313 | - | - | |
Gma19g00817 | 379 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 108 | 149 | IPR017930 | - | |
Gma19g00817 | 379 | SUPERFAMILY | Homeodomain-like | 234 | 299 | IPR009057 | - | |
Gma19g00817 | 379 | MobiDBLite | consensus disorder prediction | 144 | 212 | - | - | |
Gma19g00817 | 379 | Gene3D | - | 113 | 250 | - | - | |
Gma19g00817 | 379 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 246 | 300 | IPR017930 | - | |
Gma19g00817 | 379 | PANTHER | OS08G0435700 PROTEIN | 96 | 149 | - | - | |
Gma19g00817 | 379 | PANTHER | OS08G0435700 PROTEIN | 234 | 319 | - | - | |
Gma19g00817 | 379 | MobiDBLite | consensus disorder prediction | 41 | 73 | - | - | |
Gma19g00817 | 379 | SMART | sant | 250 | 298 | IPR001005 | - | |
Gma19g00817 | 379 | SMART | sant | 112 | 154 | IPR001005 | - | |
Gma19g00817 | 379 | MobiDBLite | consensus disorder prediction | 36 | 73 | - | - | |
Gma19g00817 | 379 | SUPERFAMILY | Homeodomain-like | 96 | 148 | IPR009057 | - | |
Gma19g00817 | 379 | Pfam | Myb-like DNA-binding domain | 251 | 294 | IPR001005 | - | |
Gma19g00817 | 379 | Pfam | Myb-like DNA-binding domain | 113 | 148 | IPR001005 | - | |
Gma19g00817 | 379 | PANTHER | MYB PROTEIN-RELATED | 96 | 149 | - | - | |
Gma19g00817 | 379 | ProSiteProfiles | Myb-like domain profile. | 108 | 148 | IPR001005 | - | |
Gma19g00817 | 379 | CDD | SANT | 115 | 149 | IPR001005 | - | |
Gma19g00817 | 379 | PANTHER | MYB PROTEIN-RELATED | 234 | 319 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma19g00817 | Gma-Chr19 | 32883571 | 32899558 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma19g00817 | 234 | 306 | MYB Transcription Factor Family | AT1G17950 | 93.151 | 4.99e-43 | 148 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Gma19g00817 | Myb_DNA-binding | 1.6e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma19g00817 | K09422 | - | gmx:100785170 | 293.123 |