Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00788 ATGGTCGTGAGTGGTTCCTTCCCACTAACTTCGAAGCGGAGAAGGGTCACCAGCTTTTGTTCCACCGACATGGATGCTGAAACTGCTAAGGCCAAGCTTGCTGCTGTGAAAGAAAGATTTGGACGAGAGATCCATGTTTTTGAAACATCAGTTGTTTCTTTATCTTCAAAGGCTGCATTATCCAATGGAGAGGAGACTGATGACTTCTATGAGTTTACTGCTGAAGATTATTACAGGCTTTTGGCTACTAAAAAGGAAGATAAATTCTTGAAGACTCGAAAAATCCGAGAAGCAGAAGAGGCAGCTCGTAGGTCAAGAATAACCAAAGCTGTAATTAGAGTTCGCTTCCCCGATAATCACACGTTGGAGGTTACCTTCCACCCATCCGAAACAATCCAGAGTTTAATTGATCTCCTCACTAAAGTTATTGCACAGCCAGAGCAACCATTTTATATATACACTACTCCGCCTAAGAAGGTGATCAATGACATGTCTCGGGATTTTTACACTGCTGGCTTTTGTCCTGGTGCCATTGTGTACTTCTCATACAATGTCCCAAAAGGTGATAGCACAGTGGGTGACCATACTAGTCCTTACCTCCAAGAAGAGATATTGTCTTTGAAGGATTTGCACGATGCAATTGATCAAGGCCAGCAATCTGAGCCTGTAGTACAGTCAGAACCAGAACCTGCAGTGGCAACTCATCCCCATCCCGTCGAAGAACGCAAACCTGCTGAGAAAAAGGTTGTTAAACCAAAGTGGCTAAAAATGTGA 774 0.4354 MVVSGSFPLTSKRRRVTSFCSTDMDAETAKAKLAAVKERFGREIHVFETSVVSLSSKAALSNGEETDDFYEFTAEDYYRLLATKKEDKFLKTRKIREAEEAARRSRITKAVIRVRFPDNHTLEVTFHPSETIQSLIDLLTKVIAQPEQPFYIYTTPPKKVINDMSRDFYTAGFCPGAIVYFSYNVPKGDSTVGDHTSPYLQEEILSLKDLHDAIDQGQQSEPVVQSEPEPAVATHPHPVEERKPAEKKVVKPKWLKM 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00788 257 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1-RELATED 10 257 - -
Gma19g00788 257 MobiDBLite consensus disorder prediction 234 257 - -
Gma19g00788 257 CDD UBX2_UBXN9 110 183 - -
Gma19g00788 257 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 10 257 IPR044232 GO:0032984|GO:0051117
Gma19g00788 257 SUPERFAMILY Ubiquitin-like 84 181 IPR029071 -
Gma19g00788 257 ProSiteProfiles UBX domain profile. 105 181 IPR001012 GO:0005515
Gma19g00788 257 Gene3D - 99 182 - -
Gma19g00788 257 MobiDBLite consensus disorder prediction 217 257 - -
Gma19g00788 257 Pfam UBX domain 108 175 IPR001012 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00788 Gma-Chr19 32190018 32197037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00788 22 138 C2H2 Transcription Factor Family AT2G01650 31.405 6.16e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00788 K15627 - gmx:100818386 495.738