Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00760 ATGTTGCCACTGTGCCGCCGCTTGCCCACACCACGTCGCCCTTCTTCTGTGATATCATTTCTCGCGAAGGTTGAGAATTTGTGGCAACACCTATGTCTCCATGTGGTTCAAGAGGATCAGCCCGAGGAGAAAAAGCTAATGTTGTTTGAGAAGCATTTGAATTGGTGCACTAATGCACGAAAATTTGGTGATTGGAAGAGGGTGCTTAGGGAATCTAAGGCTGCCATTGTTGTTAGAGCAAATTTTTCACCTCAGAGTGTGCACAAAATTTATAAGCATTATGGATATGCCACTGAAGTGAAGGACAATGAAGAGCATGAGGATGATTATTGTTTAGTGTGTCTAAGCCAAATTTGTAAAGGGGAAAAGGCTAGGTCTCTTCCACTGTGCAATTACAGATATCATACTGATTGTATTGGTGCTTGGTTGAAGAATCATACCACTTGCCCCCTTTGTAGGAACAAAATCGCTAACCATATCCCCCAAAATCAAAAACAAGTGAAGAGCTTAGGAGAATCTTTGTTCAATCTCATTCAGAGTTTCCCTGATCTATTGGTAGCTATTCTCTACATGATGATTCTATTTGGCATCACTGAGAGTTTCCCTTTGGTTCATTGA 618 0.4159 MLPLCRRLPTPRRPSSVISFLAKVENLWQHLCLHVVQEDQPEEKKLMLFEKHLNWCTNARKFGDWKRVLRESKAAIVVRANFSPQSVHKIYKHYGYATEVKDNEEHEDDYCLVCLSQICKGEKARSLPLCNYRYHTDCIGAWLKNHTTCPLCRNKIANHIPQNQKQVKSLGESLFNLIQSFPDLLVAILYMMILFGITESFPLVH 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00760 205 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Gma19g00760 205 SUPERFAMILY RING/U-box 99 159 - -
Gma19g00760 205 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 105 172 IPR044675 -
Gma19g00760 205 SMART ring_2 111 152 IPR001841 -
Gma19g00760 205 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 159 IPR013083 -
Gma19g00760 205 Pfam Ring finger domain 110 153 IPR001841 -
Gma19g00760 205 PANTHER RING-H2 FINGER PROTEIN ATL3 105 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00760 Gma-Chr19 31214501 31215824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00760 29 165 C3H Transcription Factor Family AT1G53820 31.293 4.16e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00760 - - gmx:100500375 218.779