Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00738 ATGGGCCAAAAGATCAAGATTGGCATCAATGGATTTGGAAGGATTGGCCGTTTGGTGGCCAGGGTGGCAATGCAGAACGATGACGTGGAGCTTGTTGCTGTTAATGATCCTTTCATCACAACTGATTACATGACTTACATGTTCAAGTATGATACTGTTCATGGGCAATTCAAAAACTGTGAGATTAAGGTTAAGGACAGTAAAACCCTTCTCTTTGGTAGTAGCTCAGTTACTGTTTTTGGAATCAGGAATCCAGAGGAAATTCCATGGGGTGAGGCTGGAGCTGATTACGTTGTTGAATCCACTGGAGTTTTCACTGATCAAGACAAGGCAGCTGCCCACTTGAAGGGTGGTGCAAAGAAGGTTATTATTTCTGCCCCAAGCAAGGATGCCCCAATGTTTGTTGTTGGTGTCAATGAGAAGGAATATAAGTCTGATATCACTGTCGTTTCTAATGCTAGCTGCACAACTAACTGTCTTGCTCCACTTGCAAAGGTAGTTATACATGACAAATTTGGTATTCTTGAAGGCCTCATGAGCACTGTTCACTCTATGACTGCCACTCAAAAGACTGTTGATGGACCATCAATGAAAGACTGGAGAGGTGGAAGAGCTGCTTCTTGTAACATCATTCCTAGTAGCACTGGAGCTGCTAAGGCTGTTGGTAAGGTGCTGCCATCCCTTAATAATAAGTTGACAGGAATGTCTTTCAGAGTTCCAACTGTAGATGTTTCAGTGGTTGATCTCACTGTCAGACTTGAGAAGGGAGCCAGTTATGATGAGATTAAAGCTGCTATCAAGGAGGCATCGGAGGGAAGTATGAAAGGAATCCTTGGTTACACAGAGGATGATGTTGTGTCTACTGATTTTGTGGGTGACAACAGGTCAAGCATTTTTGATGCAAAGGCTGGAATTTCATTGAACAACAACTTTGTGAAACTTGTCTCTTGGTATGACAATGAGTGGGGCTACAGCACACGTGTGGTTGACTTGATTCGACACATGGCCTCAGTCTAA 1017 0.4336 MGQKIKIGINGFGRIGRLVARVAMQNDDVELVAVNDPFITTDYMTYMFKYDTVHGQFKNCEIKVKDSKTLLFGSSSVTVFGIRNPEEIPWGEAGADYVVESTGVFTDQDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEKEYKSDITVVSNASCTTNCLAPLAKVVIHDKFGILEGLMSTVHSMTATQKTVDGPSMKDWRGGRAASCNIIPSSTGAAKAVGKVLPSLNNKLTGMSFRVPTVDVSVVDLTVRLEKGASYDEIKAAIKEASEGSMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGISLNNNFVKLVSWYDNEWGYSTRVVDLIRHMASV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00738 338 Gene3D Dihydrodipicolinate Reductase; domain 2 155 322 - -
Gma19g00738 338 Gene3D - 6 335 - -
Gma19g00738 338 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 1 338 - -
Gma19g00738 338 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 154 318 - -
Gma19g00738 338 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 IPR020830 GO:0016620
Gma19g00738 338 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 177 193 IPR020831 GO:0016620
Gma19g00738 338 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 274 289 IPR020831 GO:0016620
Gma19g00738 338 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 234 251 IPR020831 GO:0016620
Gma19g00738 338 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 IPR020831 GO:0016620
Gma19g00738 338 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 114 127 IPR020831 GO:0016620
Gma19g00738 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 165 IPR036291 -
Gma19g00738 338 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 5 107 IPR020828 GO:0051287
Gma19g00738 338 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 1 338 IPR020831 GO:0016620
Gma19g00738 338 TIGRFAM GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 6 330 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Gma19g00738 338 SMART gp_dh_n_7 5 155 IPR020828 GO:0051287
Gma19g00738 338 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 318 IPR020829 GO:0016620
Gma19g00738 338 PIRSF GAPDH 3 338 IPR020831 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00738 Gma-Chr19 30271087 30274931 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00738 K00134 - gmx:100810217 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01375 16 32712068 32719041 Gma19g00738 19 30271087 30274931 GST