Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00712 ATGGACGAGAGAAAAAGAATAGATCCAAGGAGCGGTTTCAACCGCGCTTCCAGAATCTTCCACAGCCTCAAGCCACCACTCCCCCTCCCTCCTCCCAACGCCACCTTCTCCGCCACAACCTACGCCCTCTCCCTCCGCCGCAACTCGCTATTTCCCGACTCCACCACCGCCCTCATCGATGCCACCACCGGCCACCGCCTCTCCCACTACGAGGTCATCAACCGCATCGAAACCCTAGCAAATAATTTCACCTCTATCCTCAAACTCTCCAAAGGCGACACTGCGCTCATTCTCTCCCCAAACCTCATCCAAGTTCCAATCCTCTGCTTCGCACTTCTTTCGCTTGGCGTGGTCGTCTCTCCCGCGAACCCTATCTCCACGCGCTCCGATCTCACGCGCCTCTTCCACCTCAGCAAACCTGCAATTGTCTTCACAGTAACTTCAGTCGTTGAGAAAACACAAGACTTTCATGTTAGAACCGTACTCCTCGACTCGCCCGAGTTCGACTCGCTCACGAAGACTCGGATTCAGATACATCCTCCGAGTCCACTCGTTTCCCCCGTGACTCAATCTGACGTGGCAGCGATTTTATACTCGTCGGGGACCACGGGGATGATGAAGGGTGTGGTAATGACGCACCGTAACCTAACGGCGTTAGCCGCGGGATACGACGCCGTTAGAGTAAACAGAAAGTATCCCGCGGTGTTCTTCTTTACGATGCCGTTTTTCCACGTGTACGGGTTCACGCTCAGTTTTAGGGCAATGGTGCTGTCGGAGACGGTGGTGATAATGGAGAGGTTCAGTTTGAGGGGGATGCTGAGCGCCGTGGAGAGGTTCGGAGTGACACACCTGGCGGTGGTGCCGCCGCTGATGGTAGCTTTGACGAAGGACAGCGTCACCAACGGGTACGATTTGAAGACGCTGGAAGGGGTTACGTGCGGTTCGTCTCCACTGGGAAAGGAAACCGCTGAGGCTTTCAAAGCAAAGTTCCCCAACGTCATGATCCTCCAGGGATACGGTTTAACAGAGTCAACTGCTGGGGTTGCCCGAACATCTCCAGAGGACGCTAATCGGGCAGGAACAACAGGTAGACTGGTATCAGGAGTGGAAGCCAAAATTGTGAATCCAAATACAGGAGAAGCCATGTTTCCCTGTGAACAAGGAGAACTTTGGATCAAATCACCTAGTATTATGAAAGGTTATGTTGGTGACCCTGAAGCAACTTCAGCAACTTTGGTGGATGGGTGGTTAAGGACTGGGGACCTCTGTTATTTTGATAACGAAGGGTTCTTGTATGTTGTAGATAGATTGAAAGAGTTGATCAAATACAAGGGGTACCAGGTTGCTCCGGCAGAGCTCGAACAATATCTCCTGTCTCACCCAGAAATAAATGATGCCGCGGTTATTCCATACCCTGATGAAGAAGCCGGCCAGGTGCCCATGGCGTTTGTGGTAAGACAACCCCAAAGTTCCCTGAGTGAAATAGAGATAATTGATTTTGTAGCCAAACAGGTTGCACCATACAAGAAAATAAGGCGTGTAGCATTTGTTGATTCAATACCGAAGAATGCCTTAGGAAAGATACTAAGGAAGGACTTAAATAAACTTGCTCTCTCTAGGCTATAA 1626 0.5105 MDERKRIDPRSGFNRASRIFHSLKPPLPLPPPNATFSATTYALSLRRNSLFPDSTTALIDATTGHRLSHYEVINRIETLANNFTSILKLSKGDTALILSPNLIQVPILCFALLSLGVVVSPANPISTRSDLTRLFHLSKPAIVFTVTSVVEKTQDFHVRTVLLDSPEFDSLTKTRIQIHPPSPLVSPVTQSDVAAILYSSGTTGMMKGVVMTHRNLTALAAGYDAVRVNRKYPAVFFFTMPFFHVYGFTLSFRAMVLSETVVIMERFSLRGMLSAVERFGVTHLAVVPPLMVALTKDSVTNGYDLKTLEGVTCGSSPLGKETAEAFKAKFPNVMILQGYGLTESTAGVARTSPEDANRAGTTGRLVSGVEAKIVNPNTGEAMFPCEQGELWIKSPSIMKGYVGDPEATSATLVDGWLRTGDLCYFDNEGFLYVVDRLKELIKYKGYQVAPAELEQYLLSHPEINDAAVIPYPDEEAGQVPMAFVVRQPQSSLSEIEIIDFVAKQVAPYKKIRRVAFVDSIPKNALGKILRKDLNKLALSRL 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00712 541 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 536 - -
Gma19g00712 541 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Gma19g00712 541 SUPERFAMILY Acetyl-CoA synthetase-like 39 539 - -
Gma19g00712 541 Gene3D - 30 438 IPR042099 -
Gma19g00712 541 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 8 536 - -
Gma19g00712 541 CDD 4CL 48 533 - -
Gma19g00712 541 Pfam AMP-binding enzyme 54 443 IPR000873 -
Gma19g00712 541 Pfam AMP-binding enzyme C-terminal domain 452 527 IPR025110 -
Gma19g00712 541 Gene3D - 439 539 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00712 Gma-Chr19 29581626 29591704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00712 2 538 Monolignol Biosynthesis Gene Families AT5G63380 49.183 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00712 - - gmx:100801143 1055.05