Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00706 ATGATGAAGATTTTCTCCTCAATTCAACCACGCACCCCACCATTTTCGTTGTACAAGATTTTTCTCTCACACTACTCAAGGACTCAACTTTCTTTTCCTACAAAGGTCTTCTTTTGCCAGGCAAAATCTGGCACAGACGGATCATTGAATTTAGAAGTGGTGTCTCCCACTCTGTTAGTAGCAGAAAAGGAAGAAGCCAAGGCTGTGTTGACTTTGTTTTTAAAGAAACAAGGTTTGAGCAATGCTATTGCCACTAGAACCAGCAAGAAGTCAGATCATTTTATTGATCACCTTGTCTCAAGGCTTCACTCTAAACACAAATCTTGGTATCTTGCAGGGAGAGAGCTAACGACTCTAGAGATCAGGGACACACTTATCCCTTATCTTGAATCTCTTTTCGAAGAGCATGGAGACATCCTAGTGAATGTAGTGGAAAACTATCCAAATCCACCTGGTAAGGATAAATCAGCTGTGCCGATTCCTCCTTCTAATCCAGTGTCAGACTCTAAGAAGCTTAAAGCTGTGTCTCGAGTGAGTGAGACAGACCCAGATGGTGGCAATCTTCGCCCTCATATTGTCTATCTCATGGACCTTGGTATGGATATTGAGCAGATTAGGAGTATCACACGACGATTTCCATCTTTTGCCTACTATAGCTTGGAGGGTAAAATTAAGCCAGTGGTTGAGTTTTTTCTTGAACTTGGAGTGCCAAAAGAGAACATTCTTACTATCCTCACTAAAAGACCTCAATTATGTGGAATCAGTCTATCTGAAAATCTTAAACCCACCATGAAGTTCTTTGAATCTTTGGGTGTTGACAAAAACCAATGGCCAAAGGTGATCTATCGCTTCCCAGCACTGCTAACTTATAGCAGGCCGAAAGTGATGGAAAGCATAGATTTTCTCCTTGAATTAGGCCTCTCAGAAGAGAGTATAGGTAAGATTTTAACTCGCTGCCCCAACATTGTTAGTTACAGTGTAGAGGACAATCTCCGACCCACGGCTAAGTACTTCCATTCTTTGGGGGTTGAAGTTGGCGTTCTTCTCTTCAGATGCCCTCAAAATTTTGGTCTTAGCATTGAGAACAACCTAAAGCCTGCAACAGAATTTTTCTTGGAGCGGGGATACACTTTGGAAGAAATTGGGACCATGATTTCAAGATATGGAGCCTTGTATACTTTCAGCTTGACTGAAAATTTGATTCCAAAATGGGATTTCTTCTTGACCACAGGTTACCCAAAATCTGAGTTGGTTAAGTTCCCTCAATATTTTGGATACAATTTAGAGGAAAGGGTTAAACCTAGATTCACAATTATGAAAAAATATGGAGTGAAGTTACTGCTGAATCAGGTTCTTTCACTGTCAAGCAGCAACTTTGATGAAGCCTTGAAAAAGAAAATGAAGAAAATGCAAGTTAGTTAG 1422 0.4058 MMKIFSSIQPRTPPFSLYKIFLSHYSRTQLSFPTKVFFCQAKSGTDGSLNLEVVSPTLLVAEKEEAKAVLTLFLKKQGLSNAIATRTSKKSDHFIDHLVSRLHSKHKSWYLAGRELTTLEIRDTLIPYLESLFEEHGDILVNVVENYPNPPGKDKSAVPIPPSNPVSDSKKLKAVSRVSETDPDGGNLRPHIVYLMDLGMDIEQIRSITRRFPSFAYYSLEGKIKPVVEFFLELGVPKENILTILTKRPQLCGISLSENLKPTMKFFESLGVDKNQWPKVIYRFPALLTYSRPKVMESIDFLLELGLSEESIGKILTRCPNIVSYSVEDNLRPTAKYFHSLGVEVGVLLFRCPQNFGLSIENNLKPATEFFLERGYTLEEIGTMISRYGALYTFSLTENLIPKWDFFLTTGYPKSELVKFPQYFGYNLEERVKPRFTIMKKYGVKLLLNQVLSLSSSNFDEALKKKMKKMQVS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00706 473 PANTHER CGI-12 PROTEIN-RELATED 25 471 IPR003690 GO:0003690|GO:0006355
Gma19g00706 473 Pfam mTERF 361 459 IPR003690 GO:0003690|GO:0006355
Gma19g00706 473 Pfam mTERF 192 373 IPR003690 GO:0003690|GO:0006355
Gma19g00706 473 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF5, CHLOROPLASTIC 25 471 - -
Gma19g00706 473 MobiDBLite consensus disorder prediction 152 183 - -
Gma19g00706 473 Gene3D Transcription termination factor 3, mitochondrial 249 469 IPR038538 -
Gma19g00706 473 SMART mt_12 206 237 IPR003690 GO:0003690|GO:0006355
Gma19g00706 473 SMART mt_12 382 413 IPR003690 GO:0003690|GO:0006355
Gma19g00706 473 SMART mt_12 169 201 IPR003690 GO:0003690|GO:0006355
Gma19g00706 473 SMART mt_12 278 308 IPR003690 GO:0003690|GO:0006355
Gma19g00706 473 SMART mt_12 346 377 IPR003690 GO:0003690|GO:0006355
Gma19g00706 473 SMART mt_12 313 344 IPR003690 GO:0003690|GO:0006355
Gma19g00706 473 SMART mt_12 242 273 IPR003690 GO:0003690|GO:0006355
Gma19g00706 473 SMART mt_12 414 445 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00706 Gma-Chr19 29430573 29433806 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma19g00706 mTERF 6.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00706 K15032 K12177 gmx:100775277 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00719 05 9544339 9547752 Gma19g00706 19 29430573 29433806 GST