Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00684 ATGAAGTTGTTATTGTCTCGTGATTTCCCTCACTCTCCTCCTAAAGGGTTTTTCCTTACAAAGATTTTCCATCCAAATATTGCAACCAATGGAGAGATTTGTGTCAACACACTTAAAAAGGATTGGAACCCTAACCTTGGGTTGCGTCATGTTCTCATTGTTGTTAGGTGTCTACTAATTGAGCCATTTCCAGAATCAGCTCTAAATGAACAGGCTGGGAAACTGCTGCTTGAAAATTATGAGGAGTATGCCAGACATGCCAGACTTTACACAGGAATCCATGCAAAACCAAAGTCCAAATTCAAAACTGGAGCTATATCTGAATCTACAACTGCTCTGAATGTTGATCAGAGTAACACCTCAGTTCTTAATGCTGAAGTCAAAACTGCACCATCGGGTGCGACATTGCCATTGCAATCACCATTGGCCCCCTCAACTAACAACACAACAAGAGGAAACAAGCAGGAACAGGCTGTGGTTGGAGCTGAGCCAGCTGTTAACAGTTCTTGTGCCACATCCATGGTTCATGCTGCTGCACCAATGAAGGCAGGTGGAGTAGCAAAAGCTCAGGCTGACAAGAAGAAGATTGATGCCCGGAAAAGAAGTTTGAAAAGATTGTAA 621 0.43 MKLLLSRDFPHSPPKGFFLTKIFHPNIATNGEICVNTLKKDWNPNLGLRHVLIVVRCLLIEPFPESALNEQAGKLLLENYEEYARHARLYTGIHAKPKSKFKTGAISESTTALNVDQSNTSVLNAEVKTAPSGATLPLQSPLAPSTNNTTRGNKQEQAVVGAEPAVNSSCATSMVHAAAPMKAGGVAKAQADKKKIDARKRSLKRL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00684 206 SMART ubc_7 1 96 - -
Gma19g00684 206 Coils Coil 186 206 - -
Gma19g00684 206 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 96 IPR000608 -
Gma19g00684 206 CDD UBCc 1 91 IPR000608 -
Gma19g00684 206 SUPERFAMILY UBC-like 2 97 IPR016135 -
Gma19g00684 206 MobiDBLite consensus disorder prediction 133 156 - -
Gma19g00684 206 Gene3D Ubiquitin Conjugating Enzyme 1 109 IPR016135 -
Gma19g00684 206 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 1 200 - -
Gma19g00684 206 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 22-LIKE 1 200 - -
Gma19g00684 206 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 23 38 IPR023313 -
Gma19g00684 206 MobiDBLite consensus disorder prediction 183 206 - -
Gma19g00684 206 MobiDBLite consensus disorder prediction 133 159 - -
Gma19g00684 206 Pfam Ubiquitin-conjugating enzyme 2 90 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00684 Gma-Chr19 28089866 28094691 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00684 K10583 - gmx:100794952 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g00684 19 28089866 28094691 Gma16g00400 16 4238104 4241209 GST