Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00683 ATGGCCACTGACATGGGAGATCTTCTAGATACTTTTTCTGAGGTAGACAGAAGCCTTAACTTCATTGCACACAAGTCGTTTGGGGTGGAAGCAGAAAAACGAGCAATGCCTTTAATTATAGACCCAAGTCTTTACAGGACAAAGAAGTCTGATGTGTTTTGGGTTGGTCCTAAGAGAATTTGCCAACAACATTTAAACTATTTACTGGATTCTTCTGATATGCAAACACACAGATGGGATTGCTTTTGGATTTTTCTTCTTCGTCGCCAAGAAACTTCAGTTAGAAGGGTACTTCTTTTCATGCTCTATGGTTTCACCTACTCTGGGCCCTTTGGACATTTTCTCCACAAATTGATGGATAAAATATTTAAGGGGAGAAAGGCAATGACACTGTTGCTAAGAAGGGAAATTGATATTGGTGTTCCTGATGAAGTTGGAAGACTTGAAGTCCTTCGCGTACATACGAAAAACATGAAGCTTTCAGATGATGTTGATCTAGAGAGAATTGCAAAAGATACTCATGGATATGTTGGTGCTGACCTTGCTGCCCTTTGCACTGAAGTTGCTCTTCAATGCATCAGGGAGAAAATGGATGTCATCGATTTGGAAGATGAGAGTATTGATGCTGAAGTACTAAATTCTATGGCAATTTCAAATGAGCATTTCCATACTGCTCTGGGAACAAGCAATCCATCTGCTTTACGAGAAACTGTTGTTGAGGTGCCTAATGTCAGCTGGGAGGATATTGGAGGCCTTGAGAATGTCAAGCGTGAGCTGCAAGAGACTGTTCAATATCCTGTGGAGCACCCAGAAAAATTTGAGAAGTTTGGATGTGGAAAAACTTTGTTGGCCAAAGCAATTGCTAATGAATGTCAAGCTAACTTCATCAGTGTGAAGGGCCCAGAATTGCTCACTATGTGGTTTGGTGAAAGTGAAGCCAATGTTCGAGAAATTTTTGACAAGGCCAAACAATCAGCTCCATGTGTCCTCTTCTTTGATGAGCTTGATTCCATTGCTACTCAGGTAGCAGCAATTCCTAGAGACATAAAGAGTCAAGAAAAAGAAATTGGAGAAGAAGATAACAAACTCTGCTAA 1095 0.4064 MATDMGDLLDTFSEVDRSLNFIAHKSFGVEAEKRAMPLIIDPSLYRTKKSDVFWVGPKRICQQHLNYLLDSSDMQTHRWDCFWIFLLRRQETSVRRVLLFMLYGFTYSGPFGHFLHKLMDKIFKGRKAMTLLLRREIDIGVPDEVGRLEVLRVHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEVALQCIREKMDVIDLEDESIDAEVLNSMAISNEHFHTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKAKQSAPCVLFFDELDSIATQVAAIPRDIKSQEKEIGEEDNKLC 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00683 364 Gene3D - 142 237 - -
Gma19g00683 364 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 236 341 IPR027417 -
Gma19g00683 364 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 232 IPR027417 -
Gma19g00683 364 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D 134 344 - -
Gma19g00683 364 Gene3D - 241 342 IPR027417 -
Gma19g00683 364 CDD AAA 250 342 - -
Gma19g00683 364 Pfam AAA+ lid domain 163 205 IPR041569 -
Gma19g00683 364 PANTHER AAA-FAMILY ATPASE 134 344 - -
Gma19g00683 364 Pfam ATPase family associated with various cellular activities (AAA) 277 342 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00683 Gma-Chr19 27788786 27794628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00683 213 340 Calmodulin-binding Proteins AT3G56690 42.958 5.37e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00683 K13525 - gmx:102664051 556.599