Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00665 ATGGACAATAGTATTCTGGGTCTTCTCAAACTTCGAATTAAAAGAGGCACTAATCTTGCAATACGCGATGCAATAAAAATGCATGCCAGCGACCCTTATGTCATCATCAACATGGGTGAACAGAAGCTAAAGACTGGTGTTGTAAAAGACAACTGCAATCCTGAGTGGAATGAAGAATTCACCCTTTCCATAAAGGACGTCAAAACCCCAATACATCTTTCGGTTTATGACAAGGACACTTTATCTGGAGATGACAAAATGGGTGAGGCAGATATAGACTTGAAACCGTATGTTCAGTGTGTACAAATGGGGTTGAACGAGCGCCCAGATGATTCTTCAGTCAAGAGGATTCAACCAGATGACACTAATTGCCTTGCTGAAGAGAGCAACTGCATTTGGCAAAATGGAAATATTATCCAAGAAATGATTTTGAAATTGAGAAATGTCGAGAGTGGGGAAGTAGTTGTTGAAATTGAGTGGGTTGATGTTATTGGTTGCAAGGGCTTATCACAGGTAGAACTTTAA 525 0.4019 MDNSILGLLKLRIKRGTNLAIRDAIKMHASDPYVIINMGEQKLKTGVVKDNCNPEWNEEFTLSIKDVKTPIHLSVYDKDTLSGDDKMGEADIDLKPYVQCVQMGLNERPDDSSVKRIQPDDTNCLAEESNCIWQNGNIIQEMILKLRNVESGEVVVEIEWVDVIGCKGLSQVEL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00665 174 Gene3D C2 domain 5 167 IPR035892 -
Gma19g00665 174 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 171 IPR044562 -
Gma19g00665 174 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 4 171 - -
Gma19g00665 174 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 95 IPR035892 -
Gma19g00665 174 Pfam C2 domain 8 96 IPR000008 -
Gma19g00665 174 SMART C2_3c 8 106 IPR000008 -
Gma19g00665 174 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00665 Gma-Chr19 25833751 25835596 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00665 42 171 C2H2 Transcription Factor Family AT1G70790 58.333 1.63e-52 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00665 - - gmx:100784381 348.206