Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00646 atggattccacgCTTGCAGCAAAGTTCCGTAACTGTGGACAAACATGTGTTTGTGCAAATAGAATTATTGTGCAAGAAGATATATATGAGAAGTTTGCAAATGCTTTACGTGATGTTGTTCATAATATGAAAGTCGGGGATGGTTTTAGTGAAGGTTTGGGTTCATATGTATTTACAAACAGTATCCAACGATCGTGGCGTGTGGCTGAGGCTCTTGAATATGGACTAGTGGGTGTTAATGAAGGAGTAATTTCAACTGAGGTGGCTCCATTTGGTGGTTTTAAACAGTCTGGCCTCAGAAGAGAAGACTCCAAATATGGGATGGATGAATATTTAGAGGCATGTTCTAGCATGAAAGTTTCATTGTTTCATTGA 375 0.376 MDSTLAAKFRNCGQTCVCANRIIVQEDIYEKFANALRDVVHNMKVGDGFSEGLGSYVFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGFKQSGLRREDSKYGMDEYLEACSSMKVSLFH 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00646 124 Pfam Aldehyde dehydrogenase family 52 113 IPR015590 GO:0016491
Gma19g00646 124 Pfam Aldehyde dehydrogenase family 2 50 IPR015590 GO:0016491
Gma19g00646 124 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 51 IPR016163 GO:0016620
Gma19g00646 124 SUPERFAMILY ALDH-like 3 113 IPR016161 GO:0016491
Gma19g00646 124 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 87 113 IPR016162 GO:0016491
Gma19g00646 124 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 52 86 IPR016163 GO:0016620
Gma19g00646 124 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 9 20 IPR016160 GO:0016491
Gma19g00646 124 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 52 114 - -
Gma19g00646 124 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 3 52 - -
Gma19g00646 124 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 52 114 - -
Gma19g00646 124 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 3 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00646 Gma-Chr19 21953619 21956884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00646 4 64 Aldehyde Dehydrogenase Gene Family AT1G79440 53.968 6.80e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00646 K17761 - gmx:100793318 124.02