Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00636 ATGGAGCAAGGGAGCACAGACACTCGTGTGGATGCAAACCCAAGTCTTTCCAGTCACGAAGAAATACAATCTTTGGATTTCGATACTGAGTGTGAGACCAAAATGACCAACTCTGCTGGAAACGGGGCAGGAGGTTCTTCCTATGTTGAAGAAGGCGTGAGAAAAAAGCGCGGCAGAAAAAGTAAAAAGGAGATGGGAAAGATGTTAGATGCTACCGCCATGGAAGGTGGGGTTTCCGAGCAGAGACCCAGTAGAAAAAGAAAGAAATATGATGAAATGGCTGAATTTGAAATGTCTGGCACTGAGAAAAAATATGGTCTTAGGGGCTGTAAACAAGAGATGGAGCCAAAAGCCAACAGGAGAAAGGCCAAGTGTGATGAAGAGGGCCCCTTAACGTGCCATCAATGTAAGAGAAATGATAAAGGCAGGGTTGTGAGGTGCAAATGCTGTAACAAGAGAAGATTTTGCCTATTGTGTTTACAAGCTTGGTATCCTCATTTGAAAGAGGATGATATTGCTGAGAAATGTCCTGTGTGCCGTGGTAATTGCAATTGCAAAGCATGCTTGAGCTGTGATGAACTTATTAAGCAAATGAGGGAGTTTGCAAAAGCTGACAAAGAAGAGAAGGTTGAACTCTGTATGTATTTGCTGCAAGTACTTCTTCCATATTTACGGCAGTTGGATGAAGAACAGTTGATTGAGAATGAGACAGAAGCTAAGATACAAGGGCTCTCAGTCTCCAAGCTAAATTTAGCTAAGGCAGATTACTCTATGGAGGAGCGTGTGTACTGTGACAACTGCAAAACATCAATATTTGATTACCATAGAAGCTGCACAAAATGCTCTTTTGACCTTTGTCTCATCTGTTGCCGTGAGCTTCGTGGTGGGCAGCTTGTAGGTGGTGCAGATCCAATAGAGTTGGAGTTTGTTTGGCAAGGTCGTGGTTACTTGCATGCTGAAAAAAAAGATGAAGAGGTAAAACAAAATGCATCAGATGATGATTGTAAGCCTGAGGTTCGTGAATGGTCAAGATCTGGGTGGCTGGCACAAAGTGATGGTAGCATTCCTTGTCCAAAAGTCAATGATGAATGTAACCATGGTTTTCTTGAACTGAGAAGCATATTGGGTCAACATTTTGTCTCTGAGTTAGTGTGTAAAGCAAAAGAACTAGTGCAAGCATACAAGCTTCAAAATGTAGTTAAGACCGCAGACAACTTCTGTTCATGTTTGAAGCTTGATAGAAACACAGATGTTAGCTATAGTAATATGAGGAAGGCTGCTTCTCGAGAAGATTTGACTGACAACTATTTATACTGTCCTAAAGCTGTAGATCTTCAGTACAAGGATTTAAGGCATTTTCAGTGGCATTGGGAAAAGGGAGAGCCTGTCATTGTCAGCAATGTGCTTGAATGTACATCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTACGTCATGTAACTAATACCAAGCGTGGCCAACATTTGGCTGAGAAAACAATTGATTGCTTAGATTGGACTGAGGGGGAAATTAATATCCACCAATTTTTTACTGGCTATACAAATGGTCGTAAGGATTGGCTTGCTTGGCCACAGATATTGAAATTAAAAGATTGGCCTCCTTCTAATTTATTTGAGGAACAATTGCCTCGTCATTGTGCTGAGTTCATATCTTCCTTACCCTTCAAGGAATATACTGATCCTCACAAAGGTTCTCTTAACCTTGCTGTGAAGTTGCCTAATGGTTCTCTAAAGCCAGACCTGGGGCCAAAAACATATATTGCTTATGGATTTCCTCAGGAGCTTGGACGTGGTGATTCAGTGACTAAGCTCCATTGTGATATGTCTGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTGAAACTGGATTCTGATCAACTTACTATCATTGAGAAGTTGAAGCAAAAGCACCTCGAGCAAGAGAAAAGGGAGCTACTTGGTGATGATCAGGATGGAGGAACTAATGTTGACATGCTTAATAATTCGTCTTCTACAATAAATGCTTTGGACAAGCAAAGTAGTGTTGAAGTCATGGAACAAGAAGGTGGATTATGTGATGGGAAAGAAGTTGACCAGTTTCATCAACCGTCTCGTAGTAATGAGGTTGCCATTGCTAATGAGGATGGTATTTCATATGGATCAGAGCTCATAGAGGTTGACAAAGTAAAAATAAATCAAGGTGATTTGTTGTTTGGGGGGGATGCTTCAGATGGTGCTCTCTGGGATATTTTTCGGAGACAGGATGTCCCTAAGTTGCAGGAATATCTGAAGAAGCATTTCAGAGAGTTTAGGCATGTCCATTGCTGTCCTTTAAAGCAGGTTATTCATCCCATCCATGACCAGACCTTCTATCTGACTATGGAGCATAAGAGGAAGCTTAAGGAGGAGTATGGAATTGAGCCCTGGACTTTTATTCAGAAGTTAGGAGATGCTGTTTTTATTCCAGTTGGTTGTCCTCACCAAGTCAGAAATCTGAAGTCATGTATCAAGGTTGCAATGGATTTTGTGTCTCCTGAAAATGTTGGGGAGTGCTTTCGTTTGACGGAGGAATTTCGCACACTTCCAATTAATCACAGGTCTACTGAGGACAAATTGGAGGTGAAGAAAATGACAATATATGCAATGGAAGATGTGATTGGAAAGTTGGAGAAAGCAAGGTCCGGGTTAACCAAGGGTCCAGAGTAA 2715 0.4158 MEQGSTDTRVDANPSLSSHEEIQSLDFDTECETKMTNSAGNGAGGSSYVEEGVRKKRGRKSKKEMGKMLDATAMEGGVSEQRPSRKRKKYDEMAEFEMSGTEKKYGLRGCKQEMEPKANRRKAKCDEEGPLTCHQCKRNDKGRVVRCKCCNKRRFCLLCLQAWYPHLKEDDIAEKCPVCRGNCNCKACLSCDELIKQMREFAKADKEEKVELCMYLLQVLLPYLRQLDEEQLIENETEAKIQGLSVSKLNLAKADYSMEERVYCDNCKTSIFDYHRSCTKCSFDLCLICCRELRGGQLVGGADPIELEFVWQGRGYLHAEKKDEEVKQNASDDDCKPEVREWSRSGWLAQSDGSIPCPKVNDECNHGFLELRSILGQHFVSELVCKAKELVQAYKLQNVVKTADNFCSCLKLDRNTDVSYSNMRKAASREDLTDNYLYCPKAVDLQYKDLRHFQWHWEKGEPVIVSNVLECTSGLSWEPLVMWRALRHVTNTKRGQHLAEKTIDCLDWTEGEINIHQFFTGYTNGRKDWLAWPQILKLKDWPPSNLFEEQLPRHCAEFISSLPFKEYTDPHKGSLNLAVKLPNGSLKPDLGPKTYIAYGFPQELGRGDSVTKLHCDMSDAVNVLTHIAEVKLDSDQLTIIEKLKQKHLEQEKRELLGDDQDGGTNVDMLNNSSSTINALDKQSSVEVMEQEGGLCDGKEVDQFHQPSRSNEVAIANEDGISYGSELIEVDKVKINQGDLLFGGDASDGALWDIFRRQDVPKLQEYLKKHFREFRHVHCCPLKQVIHPIHDQTFYLTMEHKRKLKEEYGIEPWTFIQKLGDAVFIPVGCPHQVRNLKSCIKVAMDFVSPENVGECFRLTEEFRTLPINHRSTEDKLEVKKMTIYAMEDVIGKLEKARSGLTKGPE 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00636 904 MobiDBLite consensus disorder prediction 1 89 - -
Gma19g00636 904 SMART cupin_9 551 862 IPR003347 -
Gma19g00636 904 Pfam JmjC domain, hydroxylase 749 845 IPR003347 -
Gma19g00636 904 PANTHER - 42 889 - -
Gma19g00636 904 ProSiteProfiles JmjC domain profile. 570 862 IPR003347 -
Gma19g00636 904 SUPERFAMILY Clavaminate synthase-like 448 884 - -
Gma19g00636 904 MobiDBLite consensus disorder prediction 29 44 - -
Gma19g00636 904 MobiDBLite consensus disorder prediction 1 22 - -
Gma19g00636 904 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 42 889 IPR045109 GO:0032454|GO:0033169
Gma19g00636 904 MobiDBLite consensus disorder prediction 50 69 - -
Gma19g00636 904 ProSiteProfiles Zinc finger RING-type profile. 133 180 IPR001841 -
Gma19g00636 904 Gene3D Cupin 436 871 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00636 Gma-Chr19 20410191 20425569 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Gma19g00636 JmjC 3.1e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00636 K15601 - gmx:100797799 1753.8