Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g00627 ATGGCGTCACCTGGTTCCCCTTACCTCCTCCTTCCCACCACCATCTCCCTGTCGTTTTACCTCTCCCTTGTCGTCCACTCCGCCGCCAGCAACCCCGACTTCCACCCCCTAATGTCGTTCAAAGCCTCCTCCGACCCTTCCAACAAATTCCTCTCCCAATGGAACTCCACGTCCTCCAACCCCTGCACCTGGCACGGCGTCTCCTGCCTCCACCACCGCGTCTCCCACCTCGTCCTCGAAGACCTCAACCTCACCGGCTCCATCCTCCCCCTCACTTCCCTCACCCAACTCCGCATCCTCAGCCTTAAACGCAACCGTTTTGACGGTCCCTTCCCCTCCCTCTCCAACCTCACCGcCCTCAAGCTCCTCTTCCTCTCCCACAACAAATTCTCCGGCGAGTTTCCCGCCACCGTCACCTCCCTCCCCCACCTCTACCGCCTCGACATCTCCCACAACAACCTCTCTGGCCAGATTCCGGCCACTGTCAACCATTTAACCCACCTCCTCACCCTCCGCCTCGACTCCAACAACCTCCGCGGCCGCATTCCCAACATGATCAACCTTTCTCATCTTCAAGATTTCAACGTTTCGAGTAACCAACTCTCCGGTCAAATACCCGATTCGCTTTCAGGCTTCCCCGGGTCCGCGTTTTCTAACAACCTTTTTCTCTGTGGAGTTCCGTTACGAAAATGCAAAGGCCAGACAAAAGCTATCCCTGCCCTCGCTTCGCCGTTGAAGCCTCGAAACGACACAGTTTTGAATAAAAGAAAAACCCACGGGGCAGCGCCAAAAATTGGGGTGATGGTTTTGGTTATTATTGTTCTCGGCGACGTGTTGGTGTTGGCTCTTGTTTCATTTCTTCTCTACTGCTATTTCTGGCGGTTATTAAAAGAAGGGAAAGCAGAGACTCATTCGAAGTCGAATGCGGTGTACAAAGGGTGTGCCGAGAGGGGTGTAAACAGCGACGGGATGGTGTTTTTGGAAGGAGTGATGAGGTTTGAGTTGGAGGAATTGCTGCGTGCGTCTGCGGAAATGTTGGGGAAGGGCGTGTTTGGGACTGCGTATAAAGCGGTGCTCGATGATGGGACCGTTGCTGCGGTGAAGAGACTGAAAGAAGTGAGTGTTGGAGGGAAGAGGGAGTTCCAGCAGCGAATGGAAGTGCTTGGAAGGTTGAGACACTGCAATGTTGTTCCTTTGAGGGCTTACTATTTCGCCAAAGATGAGAAGTTGCTTGTGTCCGATTACATGCCCAATGGTAGCTTGTCCTGGCTCCTCCACGGTAACCGAGGACCGGGACGGACCCCACTGGATTGGACCACGCGGGTGAAACTCGCAGCTGGAGCGGCACGAGGCATAGCCTTCATTCACAACAGTGATAAGCTCACCCACGGTAATATCAAATCCACGAACGTTCTTGTCGACGTGGTGGGCAACGCGTGCGTGTCGGATTTCGGGCTCTCCTCCATCTTCGCCGGCCCCACGTGTGCTCGATCCAACGGGTACCTCGCGCCGGAGGCATCATTGGATGGCCGGAAGCAGACCCATATGTCTGACGTGTACTCCTTCGGGGTCCTCCTGATGGAGATTCTGACGGGGAAGTGCCCCTCCGCTGCCGCGGAGGCGCTGGAGCTTCCCCGGTGGGTCCGTTCAGTGGTGAGGGAGGAATGGACGGCGGAGGTGTTCGATCTCGAGCTGATGAGGTACAAGGACATTGAGGAGGAGATGGTGGCGCTGTTGCAGATTGCTATGGCGTGCACTGTGGCGGCGCCTGATCAACGACCCAGGATGAGCCACGTAGCGAAAATGATCGAGGACTTGAGTGGGATCCACGTGTCGCCGTCTCATGACGCGTTGGACTTGGTTTCGGAGTCGCCTTCTGTGCCTGAAGATGCGTGTACAGGAGGAGGTGGAGCTAGTGCTAGTCAATGA 1929 0.5578 MASPGSPYLLLPTTISLSFYLSLVVHSAASNPDFHPLMSFKASSDPSNKFLSQWNSTSSNPCTWHGVSCLHHRVSHLVLEDLNLTGSILPLTSLTQLRILSLKRNRFDGPFPSLSNLTALKLLFLSHNKFSGEFPATVTSLPHLYRLDISHNNLSGQIPATVNHLTHLLTLRLDSNNLRGRIPNMINLSHLQDFNVSSNQLSGQIPDSLSGFPGSAFSNNLFLCGVPLRKCKGQTKAIPALASPLKPRNDTVLNKRKTHGAAPKIGVMVLVIIVLGDVLVLALVSFLLYCYFWRLLKEGKAETHSKSNAVYKGCAERGVNSDGMVFLEGVMRFELEELLRASAEMLGKGVFGTAYKAVLDDGTVAAVKRLKEVSVGGKREFQQRMEVLGRLRHCNVVPLRAYYFAKDEKLLVSDYMPNGSLSWLLHGNRGPGRTPLDWTTRVKLAAGAARGIAFIHNSDKLTHGNIKSTNVLVDVVGNACVSDFGLSSIFAGPTCARSNGYLAPEASLDGRKQTHMSDVYSFGVLLMEILTGKCPSAAAEALELPRWVRSVVREEWTAEVFDLELMRYKDIEEEMVALLQIAMACTVAAPDQRPRMSHVAKMIEDLSGIHVSPSHDALDLVSESPSVPEDACTGGGGASASQ 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g00627 642 Gene3D Phosphorylase Kinase; domain 1 304 415 - -
Gma19g00627 642 Gene3D Transferase(Phosphotransferase) domain 1 416 616 - -
Gma19g00627 642 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 621 - -
Gma19g00627 642 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Gma19g00627 642 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Gma19g00627 642 ProSiteProfiles Protein kinase domain profile. 340 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00627 642 Gene3D Ribonuclease Inhibitor 187 232 IPR032675 -
Gma19g00627 642 SUPERFAMILY Protein kinase-like (PK-like) 344 603 IPR011009 -
Gma19g00627 642 MobiDBLite consensus disorder prediction 620 642 - -
Gma19g00627 642 Gene3D Ribonuclease Inhibitor 31 186 IPR032675 -
Gma19g00627 642 PANTHER - 23 621 - -
Gma19g00627 642 Pfam Protein kinase domain 344 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g00627 642 SUPERFAMILY L domain-like 30 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g00627 Gma-Chr19 18083280 18087584 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g00627 33 634 Receptor kinase-like Gene Family AT1G68400 59.750 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma19g00627 Pkinase 1.7e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g00627 - - gmx:100810749 1261.51